BLASTX nr result
ID: Coptis23_contig00038220
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00038220 (277 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002327725.1| predicted protein [Populus trichocarpa] gi|2... 122 3e-26 gb|AAR14271.1| predicted protein [Populus tremula x Populus alba] 117 7e-25 ref|XP_002277754.1| PREDICTED: ATP-dependent DNA helicase Q-like... 117 1e-24 ref|XP_002530733.1| DNA helicase, putative [Ricinus communis] gi... 116 2e-24 ref|XP_002454658.1| hypothetical protein SORBIDRAFT_04g035010 [S... 114 1e-23 >ref|XP_002327725.1| predicted protein [Populus trichocarpa] gi|222836810|gb|EEE75203.1| predicted protein [Populus trichocarpa] Length = 326 Score = 122 bits (306), Expect = 3e-26 Identities = 59/70 (84%), Positives = 64/70 (91%) Frame = -3 Query: 275 LKSSGDACSIVYCLERTACDNLSSHLLKNGISSAAYHAGLNNKLRSSVLNDWLSSRIQVV 96 LKS GD C+IVYCLERT CD LS+HL KNGISSAAYHAGLNNKLRSSVL+DW+SS+IQVV Sbjct: 252 LKSCGDICAIVYCLERTTCDGLSAHLSKNGISSAAYHAGLNNKLRSSVLDDWISSKIQVV 311 Query: 95 VATVAFGYFL 66 VATVAFGY L Sbjct: 312 VATVAFGYDL 321 >gb|AAR14271.1| predicted protein [Populus tremula x Populus alba] Length = 772 Score = 117 bits (294), Expect = 7e-25 Identities = 56/67 (83%), Positives = 61/67 (91%) Frame = -3 Query: 275 LKSSGDACSIVYCLERTACDNLSSHLLKNGISSAAYHAGLNNKLRSSVLNDWLSSRIQVV 96 LKS GD C+IVYCLER CD LS+HL KNGISSAAYHAGLNNKLRSSVL+DW+SS+IQVV Sbjct: 249 LKSCGDVCAIVYCLERATCDGLSAHLSKNGISSAAYHAGLNNKLRSSVLDDWISSKIQVV 308 Query: 95 VATVAFG 75 VATVAFG Sbjct: 309 VATVAFG 315 >ref|XP_002277754.1| PREDICTED: ATP-dependent DNA helicase Q-like 3-like [Vitis vinifera] Length = 730 Score = 117 bits (293), Expect = 1e-24 Identities = 56/67 (83%), Positives = 61/67 (91%) Frame = -3 Query: 275 LKSSGDACSIVYCLERTACDNLSSHLLKNGISSAAYHAGLNNKLRSSVLNDWLSSRIQVV 96 LKS G+ C IVYCLERT CD LS+HL KNGISSAAYHAGLNNKLRSSVL+DW+SS+IQVV Sbjct: 251 LKSCGNVCGIVYCLERTTCDELSAHLSKNGISSAAYHAGLNNKLRSSVLDDWISSKIQVV 310 Query: 95 VATVAFG 75 VATVAFG Sbjct: 311 VATVAFG 317 >ref|XP_002530733.1| DNA helicase, putative [Ricinus communis] gi|223529697|gb|EEF31639.1| DNA helicase, putative [Ricinus communis] Length = 718 Score = 116 bits (291), Expect = 2e-24 Identities = 54/67 (80%), Positives = 62/67 (92%) Frame = -3 Query: 275 LKSSGDACSIVYCLERTACDNLSSHLLKNGISSAAYHAGLNNKLRSSVLNDWLSSRIQVV 96 LKSSGD C+I+YCL+RT CD L++HL KNGIS AAYHAGLNNKLRSSVL+DW+SS+IQVV Sbjct: 255 LKSSGDICAIIYCLQRTTCDGLAAHLSKNGISCAAYHAGLNNKLRSSVLDDWISSKIQVV 314 Query: 95 VATVAFG 75 VATVAFG Sbjct: 315 VATVAFG 321 >ref|XP_002454658.1| hypothetical protein SORBIDRAFT_04g035010 [Sorghum bicolor] gi|241934489|gb|EES07634.1| hypothetical protein SORBIDRAFT_04g035010 [Sorghum bicolor] Length = 714 Score = 114 bits (284), Expect = 1e-23 Identities = 54/67 (80%), Positives = 62/67 (92%) Frame = -3 Query: 275 LKSSGDACSIVYCLERTACDNLSSHLLKNGISSAAYHAGLNNKLRSSVLNDWLSSRIQVV 96 LKSSG+ACSI+YCLER ACD+LS HL + G+SSAAYHAGLN+K+RSSVL+DWLSSR QVV Sbjct: 232 LKSSGNACSIIYCLERAACDDLSMHLSQQGVSSAAYHAGLNSKVRSSVLDDWLSSRTQVV 291 Query: 95 VATVAFG 75 VATVAFG Sbjct: 292 VATVAFG 298