BLASTX nr result

ID: Coptis23_contig00038220 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038220
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327725.1| predicted protein [Populus trichocarpa] gi|2...   122   3e-26
gb|AAR14271.1| predicted protein [Populus tremula x Populus alba]     117   7e-25
ref|XP_002277754.1| PREDICTED: ATP-dependent DNA helicase Q-like...   117   1e-24
ref|XP_002530733.1| DNA helicase, putative [Ricinus communis] gi...   116   2e-24
ref|XP_002454658.1| hypothetical protein SORBIDRAFT_04g035010 [S...   114   1e-23

>ref|XP_002327725.1| predicted protein [Populus trichocarpa] gi|222836810|gb|EEE75203.1|
           predicted protein [Populus trichocarpa]
          Length = 326

 Score =  122 bits (306), Expect = 3e-26
 Identities = 59/70 (84%), Positives = 64/70 (91%)
 Frame = -3

Query: 275 LKSSGDACSIVYCLERTACDNLSSHLLKNGISSAAYHAGLNNKLRSSVLNDWLSSRIQVV 96
           LKS GD C+IVYCLERT CD LS+HL KNGISSAAYHAGLNNKLRSSVL+DW+SS+IQVV
Sbjct: 252 LKSCGDICAIVYCLERTTCDGLSAHLSKNGISSAAYHAGLNNKLRSSVLDDWISSKIQVV 311

Query: 95  VATVAFGYFL 66
           VATVAFGY L
Sbjct: 312 VATVAFGYDL 321


>gb|AAR14271.1| predicted protein [Populus tremula x Populus alba]
          Length = 772

 Score =  117 bits (294), Expect = 7e-25
 Identities = 56/67 (83%), Positives = 61/67 (91%)
 Frame = -3

Query: 275 LKSSGDACSIVYCLERTACDNLSSHLLKNGISSAAYHAGLNNKLRSSVLNDWLSSRIQVV 96
           LKS GD C+IVYCLER  CD LS+HL KNGISSAAYHAGLNNKLRSSVL+DW+SS+IQVV
Sbjct: 249 LKSCGDVCAIVYCLERATCDGLSAHLSKNGISSAAYHAGLNNKLRSSVLDDWISSKIQVV 308

Query: 95  VATVAFG 75
           VATVAFG
Sbjct: 309 VATVAFG 315


>ref|XP_002277754.1| PREDICTED: ATP-dependent DNA helicase Q-like 3-like [Vitis
           vinifera]
          Length = 730

 Score =  117 bits (293), Expect = 1e-24
 Identities = 56/67 (83%), Positives = 61/67 (91%)
 Frame = -3

Query: 275 LKSSGDACSIVYCLERTACDNLSSHLLKNGISSAAYHAGLNNKLRSSVLNDWLSSRIQVV 96
           LKS G+ C IVYCLERT CD LS+HL KNGISSAAYHAGLNNKLRSSVL+DW+SS+IQVV
Sbjct: 251 LKSCGNVCGIVYCLERTTCDELSAHLSKNGISSAAYHAGLNNKLRSSVLDDWISSKIQVV 310

Query: 95  VATVAFG 75
           VATVAFG
Sbjct: 311 VATVAFG 317


>ref|XP_002530733.1| DNA helicase, putative [Ricinus communis]
           gi|223529697|gb|EEF31639.1| DNA helicase, putative
           [Ricinus communis]
          Length = 718

 Score =  116 bits (291), Expect = 2e-24
 Identities = 54/67 (80%), Positives = 62/67 (92%)
 Frame = -3

Query: 275 LKSSGDACSIVYCLERTACDNLSSHLLKNGISSAAYHAGLNNKLRSSVLNDWLSSRIQVV 96
           LKSSGD C+I+YCL+RT CD L++HL KNGIS AAYHAGLNNKLRSSVL+DW+SS+IQVV
Sbjct: 255 LKSSGDICAIIYCLQRTTCDGLAAHLSKNGISCAAYHAGLNNKLRSSVLDDWISSKIQVV 314

Query: 95  VATVAFG 75
           VATVAFG
Sbjct: 315 VATVAFG 321


>ref|XP_002454658.1| hypothetical protein SORBIDRAFT_04g035010 [Sorghum bicolor]
           gi|241934489|gb|EES07634.1| hypothetical protein
           SORBIDRAFT_04g035010 [Sorghum bicolor]
          Length = 714

 Score =  114 bits (284), Expect = 1e-23
 Identities = 54/67 (80%), Positives = 62/67 (92%)
 Frame = -3

Query: 275 LKSSGDACSIVYCLERTACDNLSSHLLKNGISSAAYHAGLNNKLRSSVLNDWLSSRIQVV 96
           LKSSG+ACSI+YCLER ACD+LS HL + G+SSAAYHAGLN+K+RSSVL+DWLSSR QVV
Sbjct: 232 LKSSGNACSIIYCLERAACDDLSMHLSQQGVSSAAYHAGLNSKVRSSVLDDWLSSRTQVV 291

Query: 95  VATVAFG 75
           VATVAFG
Sbjct: 292 VATVAFG 298


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