BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038213
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat...    69   3e-10
ref|NP_001174317.1| Os05g0275100 [Oryza sativa Japonica Group] g...    68   9e-10
gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indi...    68   9e-10
ref|NP_568948.1| pentatricopeptide repeat-containing protein [Ar...    62   4e-08
gb|AAP40495.1| unknown protein [Arabidopsis thaliana]                  62   4e-08

>ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At1g19290-like [Vitis vinifera]
          Length = 939

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 28/61 (45%), Positives = 47/61 (77%)
 Frame = +3

Query: 3    LVNGICKHGDMETSLKFLDQMIEAGVHPNMVTYCTTLQDYIKRGDAQQISQVFNKVLLKG 182
            L+NG+CKHGD+E S+K L+QMI+AGV   ++ YCT +Q YI+ G+ Q+I ++++ + ++ 
Sbjct: 860  LINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMMHIRC 919

Query: 183  L 185
            L
Sbjct: 920  L 920


>ref|NP_001174317.1| Os05g0275100 [Oryza sativa Japonica Group]
           gi|255676205|dbj|BAH93045.1| Os05g0275100, partial
           [Oryza sativa Japonica Group]
          Length = 213

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 28/61 (45%), Positives = 45/61 (73%)
 Frame = +3

Query: 3   LVNGICKHGDMETSLKFLDQMIEAGVHPNMVTYCTTLQDYIKRGDAQQISQVFNKVLLKG 182
           L+ G+C  G ME ++K LDQMIE  V PN +TYCT +  YIK G+ ++IS++++++ ++G
Sbjct: 120 LIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRG 179

Query: 183 L 185
           L
Sbjct: 180 L 180


>gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
            gi|222630938|gb|EEE63070.1| hypothetical protein
            OsJ_17878 [Oryza sativa Japonica Group]
          Length = 939

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 28/61 (45%), Positives = 45/61 (73%)
 Frame = +3

Query: 3    LVNGICKHGDMETSLKFLDQMIEAGVHPNMVTYCTTLQDYIKRGDAQQISQVFNKVLLKG 182
            L+ G+C  G ME ++K LDQMIE  V PN +TYCT +  YIK G+ ++IS++++++ ++G
Sbjct: 846  LIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRG 905

Query: 183  L 185
            L
Sbjct: 906  L 906


>ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g61990, mitochondrial; Flags: Precursor
           gi|10176917|dbj|BAB10161.1| unnamed protein product
           [Arabidopsis thaliana] gi|332010163|gb|AED97546.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 974

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 26/61 (42%), Positives = 41/61 (67%)
 Frame = +3

Query: 3   LVNGICKHGDMETSLKFLDQMIEAGVHPNMVTYCTTLQDYIKRGDAQQISQVFNKVLLKG 182
           L+ G C+ G++E + + LD+M   G+HPN VTYCT +  Y K GD  +  ++F+++ LKG
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727

Query: 183 L 185
           L
Sbjct: 728 L 728


>gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 26/61 (42%), Positives = 41/61 (67%)
 Frame = +3

Query: 3   LVNGICKHGDMETSLKFLDQMIEAGVHPNMVTYCTTLQDYIKRGDAQQISQVFNKVLLKG 182
           L+ G C+ G++E + + LD+M   G+HPN VTYCT +  Y K GD  +  ++F+++ LKG
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727

Query: 183 L 185
           L
Sbjct: 728 L 728