BLASTX nr result

ID: Coptis23_contig00038199 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038199
         (225 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318862.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
emb|CBI24487.3| unnamed protein product [Vitis vinifera]               64   2e-08
ref|XP_002269952.1| PREDICTED: mitochondrial metalloendopeptidas...    64   2e-08
ref|XP_003534034.1| PREDICTED: uncharacterized protein LOC100799...    62   5e-08
ref|XP_001766163.1| predicted protein [Physcomitrella patens sub...    61   1e-07

>ref|XP_002318862.1| predicted protein [Populus trichocarpa] gi|222859535|gb|EEE97082.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/51 (60%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
 Frame = -3

Query: 223 VVDELSIHVFCISGGNIFIWRGLLEAF-TDDEVATFIGHEVGHVVARHEAE 74
           VV+E  ++ FC+ GG I ++ GLLE F TD E+AT IGHEVGH VARH AE
Sbjct: 210 VVNEPVVNAFCLPGGKIVVFTGLLEHFRTDAEIATIIGHEVGHAVARHAAE 260


>emb|CBI24487.3| unnamed protein product [Vitis vinifera]
          Length = 227

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/51 (58%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
 Frame = -3

Query: 223 VVDELSIHVFCISGGNIFIWRGLLEAF-TDDEVATFIGHEVGHVVARHEAE 74
           VV+E  ++ FC+ GG I ++ GLLE F TD E+AT IGHE+GH VARH AE
Sbjct: 56  VVNEPVVNAFCLPGGKIVVFTGLLEHFRTDAEIATIIGHEIGHAVARHAAE 106


>ref|XP_002269952.1| PREDICTED: mitochondrial metalloendopeptidase OMA1 [Vitis vinifera]
          Length = 434

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/51 (58%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
 Frame = -3

Query: 223 VVDELSIHVFCISGGNIFIWRGLLEAF-TDDEVATFIGHEVGHVVARHEAE 74
           VV+E  ++ FC+ GG I ++ GLLE F TD E+AT IGHE+GH VARH AE
Sbjct: 263 VVNEPVVNAFCLPGGKIVVFTGLLEHFRTDAEIATIIGHEIGHAVARHAAE 313


>ref|XP_003534034.1| PREDICTED: uncharacterized protein LOC100799127 [Glycine max]
          Length = 448

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/51 (58%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
 Frame = -3

Query: 223 VVDELSIHVFCISGGNIFIWRGLLEAFTDD-EVATFIGHEVGHVVARHEAE 74
           VV+E  ++ FC+ GG I ++ GLLE F  D E+AT IGHEVGH VARH AE
Sbjct: 276 VVNEPVVNAFCLPGGKIVVFTGLLEHFKSDAEIATIIGHEVGHAVARHGAE 326


>ref|XP_001766163.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162682595|gb|EDQ69012.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 454

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/51 (56%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
 Frame = -3

Query: 223 VVDELSIHVFCISGGNIFIWRGLLEAF-TDDEVATFIGHEVGHVVARHEAE 74
           VVD+  ++ FC+ GG I ++ GLL  F +D E+AT +GHEVGHVVARH AE
Sbjct: 281 VVDQDIMNAFCLPGGKIVVFTGLLNKFRSDTEIATVLGHEVGHVVARHGAE 331


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