BLASTX nr result

ID: Coptis23_contig00038194 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038194
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271307.2| PREDICTED: probable LRR receptor-like serine...    71   8e-11
emb|CBI29035.3| unnamed protein product [Vitis vinifera]               71   8e-11
ref|XP_002277433.2| PREDICTED: probable LRR receptor-like serine...    69   4e-10
emb|CBI22179.3| unnamed protein product [Vitis vinifera]               69   4e-10
emb|CAN76838.1| hypothetical protein VITISV_004487 [Vitis vinifera]    68   9e-10

>ref|XP_002271307.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At4g08850-like [Vitis vinifera]
          Length = 843

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 39/93 (41%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
 Frame = -1

Query: 274 SRFIQGDSSMSFGNNKGLCADFEGLPSCHSTSKKHKVIMFIVIPIVSTFLVALLIIGVRY 95
           S+F QG    SF NNKGLC D +GLP C    +++K    IVI + +T  +  +++G   
Sbjct: 459 SKFSQG----SFDNNKGLCGDIKGLPHC---KEEYKTTRIIVISLSTTLFLFFVVLGFLL 511

Query: 94  ICRKKRRTSEEIEVKE--TNHGDLFSIWRYDGK 2
           + RK R+    I+ KE  T +GD+FS+W YDGK
Sbjct: 512 LSRKTRK----IQTKEIPTKNGDIFSVWNYDGK 540


>emb|CBI29035.3| unnamed protein product [Vitis vinifera]
          Length = 789

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 39/93 (41%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
 Frame = -1

Query: 274 SRFIQGDSSMSFGNNKGLCADFEGLPSCHSTSKKHKVIMFIVIPIVSTFLVALLIIGVRY 95
           S+F QG    SF NNKGLC D +GLP C    +++K    IVI + +T  +  +++G   
Sbjct: 405 SKFSQG----SFDNNKGLCGDIKGLPHC---KEEYKTTRIIVISLSTTLFLFFVVLGFLL 457

Query: 94  ICRKKRRTSEEIEVKE--TNHGDLFSIWRYDGK 2
           + RK R+    I+ KE  T +GD+FS+W YDGK
Sbjct: 458 LSRKTRK----IQTKEIPTKNGDIFSVWNYDGK 486


>ref|XP_002277433.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At4g08850-like [Vitis vinifera]
          Length = 758

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 32/81 (39%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
 Frame = -1

Query: 244 SFGNNKGLCADFEGLPSCHSTSKKHKVIMFIVIPIVSTFLVALLIIGVRYICRKKR-RTS 68
           +FG+NKGLC + +G P C    K+H++ + IV+ + +T L+++ I+G  ++  K+R R +
Sbjct: 379 AFGHNKGLCGEIKGRPRC---KKRHQITLIIVVSLSTTLLLSIAILG--FLFHKRRIRKN 433

Query: 67  EEIEVKETNHGDLFSIWRYDG 5
           + +E  +  +GDLFSIW YDG
Sbjct: 434 QLLETTKVKNGDLFSIWDYDG 454


>emb|CBI22179.3| unnamed protein product [Vitis vinifera]
          Length = 1699

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 32/81 (39%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
 Frame = -1

Query: 244  SFGNNKGLCADFEGLPSCHSTSKKHKVIMFIVIPIVSTFLVALLIIGVRYICRKKR-RTS 68
            +FG+NKGLC + +G P C    K+H++ + IV+ + +T L+++ I+G  ++  K+R R +
Sbjct: 1362 AFGHNKGLCGEIKGRPRC---KKRHQITLIIVVSLSTTLLLSIAILG--FLFHKRRIRKN 1416

Query: 67   EEIEVKETNHGDLFSIWRYDG 5
            + +E  +  +GDLFSIW YDG
Sbjct: 1417 QLLETTKVKNGDLFSIWDYDG 1437


>emb|CAN76838.1| hypothetical protein VITISV_004487 [Vitis vinifera]
          Length = 483

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 31/81 (38%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
 Frame = -1

Query: 244 SFGNNKGLCADFEGLPSCHSTSKKHKVIMFIVIPIVSTFLVALLIIGVRYICRKKR-RTS 68
           +FG+NKGLC + +G P C    K+H++ + IV+ + +T L+++ I+G  ++  K+R R +
Sbjct: 379 AFGHNKGLCGEIKGXPRC---KKRHQITLIIVVSLSTTLLLSIAILG--FLFHKRRIRKN 433

Query: 67  EEIEVKETNHGDLFSIWRYDG 5
           + +E  +  +GDLFSIW +DG
Sbjct: 434 QLLETTKVKNGDLFSIWDFDG 454


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