BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038178
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275430.1| PREDICTED: pseudouridine kinase [Vitis vinif...    83   3e-14
emb|CAN63901.1| hypothetical protein VITISV_031685 [Vitis vinifera]    83   3e-14
gb|AFW81502.1| hypothetical protein ZEAMMB73_419515 [Zea mays]         81   8e-14
gb|AFW81501.1| hypothetical protein ZEAMMB73_419515 [Zea mays]         81   8e-14
ref|XP_002519085.1| pentatricopeptide repeat-containing protein,...    80   2e-13

>ref|XP_002275430.1| PREDICTED: pseudouridine kinase [Vitis vinifera]
           gi|297744710|emb|CBI37972.3| unnamed protein product
           [Vitis vinifera]
          Length = 426

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 53/108 (49%), Positives = 66/108 (61%)
 Frame = -1

Query: 325 MENSSVVYRRLNCLYRHLLAISYEPNNNNSALHFVNCLAGARDELFSKDVPVIIGGMVLD 146
           ME+ S   RRL+ L RH L    +P+  N +L F N L G   +    D PV+IGGMVLD
Sbjct: 1   MESGS--QRRLDSLSRHFL----QPHQANRSL-FPNLLRGVHVKDVEAD-PVLIGGMVLD 52

Query: 145 IHAKXXXXXXXXXXXPGQLYYVAGGVARNVAECMSKLGAKPFMISIIG 2
           I A            PG+++YV GGVARN+AECMSKLG KP+MIS +G
Sbjct: 53  IQATPSISAKPKTTTPGKVHYVPGGVARNIAECMSKLGTKPYMISALG 100


>emb|CAN63901.1| hypothetical protein VITISV_031685 [Vitis vinifera]
          Length = 224

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 53/108 (49%), Positives = 66/108 (61%)
 Frame = -1

Query: 325 MENSSVVYRRLNCLYRHLLAISYEPNNNNSALHFVNCLAGARDELFSKDVPVIIGGMVLD 146
           ME+ S   RRL+ L RH L    +P+  N +L F N L G   +    D PV+IGGMVLD
Sbjct: 1   MESGS--QRRLDSLSRHFL----QPHQANRSL-FPNLLRGVHVKDVEAD-PVLIGGMVLD 52

Query: 145 IHAKXXXXXXXXXXXPGQLYYVAGGVARNVAECMSKLGAKPFMISIIG 2
           I A            PG+++YV GGVARN+AECMSKLG KP+MIS +G
Sbjct: 53  IQATPSISAKPKTTTPGKVHYVPGGVARNIAECMSKLGTKPYMISALG 100


>gb|AFW81502.1| hypothetical protein ZEAMMB73_419515 [Zea mays]
          Length = 418

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 48/100 (48%), Positives = 59/100 (59%)
 Frame = -1

Query: 301 RRLNCLYRHLLAISYEPNNNNSALHFVNCLAGARDELFSKDVPVIIGGMVLDIHAKXXXX 122
           RR+  + RHLL  S  P   N     ++ LA           PVIIGGMVLDIHAK    
Sbjct: 7   RRMEAVRRHLLLPSPAPLRPNP----LSSLAEVEPS------PVIIGGMVLDIHAKPSVP 56

Query: 121 XXXXXXXPGQLYYVAGGVARNVAECMSKLGAKPFMISIIG 2
                  PG + Y++GGVARN+AECMSKLG +PFMIS++G
Sbjct: 57  PHHGTTVPGMVKYISGGVARNIAECMSKLGTQPFMISVVG 96


>gb|AFW81501.1| hypothetical protein ZEAMMB73_419515 [Zea mays]
          Length = 220

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 48/100 (48%), Positives = 59/100 (59%)
 Frame = -1

Query: 301 RRLNCLYRHLLAISYEPNNNNSALHFVNCLAGARDELFSKDVPVIIGGMVLDIHAKXXXX 122
           RR+  + RHLL  S  P   N     ++ LA           PVIIGGMVLDIHAK    
Sbjct: 7   RRMEAVRRHLLLPSPAPLRPNP----LSSLAEVEPS------PVIIGGMVLDIHAKPSVP 56

Query: 121 XXXXXXXPGQLYYVAGGVARNVAECMSKLGAKPFMISIIG 2
                  PG + Y++GGVARN+AECMSKLG +PFMIS++G
Sbjct: 57  PHHGTTVPGMVKYISGGVARNIAECMSKLGTQPFMISVVG 96


>ref|XP_002519085.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223541748|gb|EEF43296.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1157

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 49/104 (47%), Positives = 63/104 (60%)
 Frame = -1

Query: 313 SVVYRRLNCLYRHLLAISYEPNNNNSALHFVNCLAGARDELFSKDVPVIIGGMVLDIHAK 134
           S V RRL+ + RHLL +   P  +  AL+ V  + G   +   +  PV+IGGMVLDIHA 
Sbjct: 3   SSVQRRLDYISRHLLLL---PEVDTLALYPV-LVKGEEIKHNEEADPVVIGGMVLDIHAT 58

Query: 133 XXXXXXXXXXXPGQLYYVAGGVARNVAECMSKLGAKPFMISIIG 2
                      PG++ Y  GGVARN+AECMSKLG KP+MIS +G
Sbjct: 59  PSIPPYPRTTTPGKVQYALGGVARNIAECMSKLGTKPYMISALG 102