BLASTX nr result
ID: Coptis23_contig00038163
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00038163 (624 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002265645.1| PREDICTED: scarecrow-like protein 18 [Vitis ... 262 3e-68 emb|CAN64763.1| hypothetical protein VITISV_015992 [Vitis vinifera] 262 3e-68 gb|AFH54535.1| GRAS family protein, partial [Dimocarpus longan] 259 2e-67 ref|XP_002321384.1| GRAS family transcription factor LATERAL [Po... 257 1e-66 ref|XP_002318447.1| GRAS family transcription factor LATERAL [Po... 253 2e-65 >ref|XP_002265645.1| PREDICTED: scarecrow-like protein 18 [Vitis vinifera] gi|296090051|emb|CBI39870.3| unnamed protein product [Vitis vinifera] Length = 413 Score = 262 bits (670), Expect = 3e-68 Identities = 128/209 (61%), Positives = 158/209 (75%), Gaps = 1/209 (0%) Frame = +1 Query: 1 LGRTGQRLENFAKSLGLRFQFHPXXXXXXXXXXXXXXXX-IALLPEETLVVNCVLYLHRL 177 L RTG RL FA+SLGL+FQFHP + LLP+ETL VNCVLYLHRL Sbjct: 195 LQRTGDRLLKFAQSLGLKFQFHPLLLRNDPTSVPLYLPSALQLLPDETLAVNCVLYLHRL 254 Query: 178 LNRSDEEVRLFLRTIKTLKPRMVTLAEREANFNNPIFSHRFLEALDHYTALFDSMEATIP 357 L ++RLFL IK ++P++VT+AEREAN N+P+F RF+EALDHYTA+FDS+EAT+P Sbjct: 255 LKDDSRDLRLFLHKIKAMEPKVVTIAEREANHNHPLFLQRFVEALDHYTAVFDSLEATLP 314 Query: 358 PNNRERLAVEQVWFGREIMDVVAAEGXXXXXXXXXXQNWAEKMRRSGFSNVPLSPFAVSQ 537 P +RERLAVE++WFGREI+D+V+AEG ++W +R SGFSNVPLSPFA+SQ Sbjct: 315 PTSRERLAVERIWFGREIVDIVSAEGDNRRERHERFESWEVMLRSSGFSNVPLSPFALSQ 374 Query: 538 AKLVLRLHYPSEGYQLLILNDSLFLGWQN 624 AKL+LRLHYPSEGY+L I+NDS FLGWQN Sbjct: 375 AKLLLRLHYPSEGYRLQIINDSFFLGWQN 403 >emb|CAN64763.1| hypothetical protein VITISV_015992 [Vitis vinifera] Length = 377 Score = 262 bits (670), Expect = 3e-68 Identities = 128/209 (61%), Positives = 158/209 (75%), Gaps = 1/209 (0%) Frame = +1 Query: 1 LGRTGQRLENFAKSLGLRFQFHPXXXXXXXXXXXXXXXX-IALLPEETLVVNCVLYLHRL 177 L RTG RL FA+SLGL+FQFHP + LLP+ETL VNCVLYLHRL Sbjct: 159 LQRTGDRLLKFAQSLGLKFQFHPLLLRNDPTSVPLYLPSALQLLPDETLAVNCVLYLHRL 218 Query: 178 LNRSDEEVRLFLRTIKTLKPRMVTLAEREANFNNPIFSHRFLEALDHYTALFDSMEATIP 357 L ++RLFL IK ++P++VT+AEREAN N+P+F RF+EALDHYTA+FDS+EAT+P Sbjct: 219 LKDDSRDLRLFLHKIKAMEPKVVTIAEREANHNHPLFLQRFVEALDHYTAVFDSLEATLP 278 Query: 358 PNNRERLAVEQVWFGREIMDVVAAEGXXXXXXXXXXQNWAEKMRRSGFSNVPLSPFAVSQ 537 P +RERLAVE++WFGREI+D+V+AEG ++W +R SGFSNVPLSPFA+SQ Sbjct: 279 PTSRERLAVERIWFGREIVDIVSAEGDNRRERHERFESWEVMLRSSGFSNVPLSPFALSQ 338 Query: 538 AKLVLRLHYPSEGYQLLILNDSLFLGWQN 624 AKL+LRLHYPSEGY+L I+NDS FLGWQN Sbjct: 339 AKLLLRLHYPSEGYRLQIINDSFFLGWQN 367 >gb|AFH54535.1| GRAS family protein, partial [Dimocarpus longan] Length = 449 Score = 259 bits (663), Expect = 2e-67 Identities = 126/210 (60%), Positives = 157/210 (74%), Gaps = 2/210 (0%) Frame = +1 Query: 1 LGRTGQRLENFAKSLGLRFQFHPXXXXXXXXXXXXXXXX--IALLPEETLVVNCVLYLHR 174 L RTG RL FA+SLGLRFQFHP ++LLP+E L VNCVLYLHR Sbjct: 230 LHRTGDRLFMFAQSLGLRFQFHPLLLLNDDPTSVAVYLSSALSLLPDEALAVNCVLYLHR 289 Query: 175 LLNRSDEEVRLFLRTIKTLKPRMVTLAEREANFNNPIFSHRFLEALDHYTALFDSMEATI 354 L+ ++RLFL IK+L P +VT+AEREAN N+P+F RF+EALDHY+A+++S+EAT+ Sbjct: 290 LVKEDSRDLRLFLHKIKSLNPAVVTIAEREANHNHPVFMRRFVEALDHYSAIYESLEATL 349 Query: 355 PPNNRERLAVEQVWFGREIMDVVAAEGXXXXXXXXXXQNWAEKMRRSGFSNVPLSPFAVS 534 PPN++ERLAVEQ+WFGREIMD+V AEG ++W +R SGF+NVPLSPFA+S Sbjct: 350 PPNSKERLAVEQIWFGREIMDIVGAEGENRRERHERLESWEVMLRSSGFANVPLSPFALS 409 Query: 535 QAKLVLRLHYPSEGYQLLILNDSLFLGWQN 624 QAKL+LRLHYPSEGYQ+ ILN+S FLGWQN Sbjct: 410 QAKLLLRLHYPSEGYQIQILNNSFFLGWQN 439 >ref|XP_002321384.1| GRAS family transcription factor LATERAL [Populus trichocarpa] gi|222868380|gb|EEF05511.1| GRAS family transcription factor LATERAL [Populus trichocarpa] Length = 434 Score = 257 bits (656), Expect = 1e-66 Identities = 130/210 (61%), Positives = 149/210 (70%), Gaps = 2/210 (0%) Frame = +1 Query: 1 LGRTGQRLENFAKSLGLRFQFHPXXXXXXXXXXXXXXXX--IALLPEETLVVNCVLYLHR 174 L RTG RL FA+SLGLRFQFHP I LLP+E L VNCVLYLHR Sbjct: 215 LHRTGDRLLKFAQSLGLRFQFHPLLLLNNDPTTLALYLPSAITLLPDEALAVNCVLYLHR 274 Query: 175 LLNRSDEEVRLFLRTIKTLKPRMVTLAEREANFNNPIFSHRFLEALDHYTALFDSMEATI 354 L E+ LFL IK L P++VT+AEREAN N P+F RFLEALDHY ALFDS+EAT+ Sbjct: 275 FLKDDSRELLLFLHKIKALNPKVVTVAEREANHNQPLFLQRFLEALDHYKALFDSLEATL 334 Query: 355 PPNNRERLAVEQVWFGREIMDVVAAEGXXXXXXXXXXQNWAEKMRRSGFSNVPLSPFAVS 534 PPNNRERLAVEQ+WFGREI+D+VAAEG + W ++ GF+ VPLSPFA+S Sbjct: 335 PPNNRERLAVEQIWFGREILDIVAAEGEGRRERHQKFETWEMMLKSVGFNKVPLSPFALS 394 Query: 535 QAKLVLRLHYPSEGYQLLILNDSLFLGWQN 624 QAKL+LRLHYPSEGYQL IL +S FLGWQN Sbjct: 395 QAKLLLRLHYPSEGYQLQILKNSFFLGWQN 424 >ref|XP_002318447.1| GRAS family transcription factor LATERAL [Populus trichocarpa] gi|222859120|gb|EEE96667.1| GRAS family transcription factor LATERAL [Populus trichocarpa] Length = 435 Score = 253 bits (646), Expect = 2e-65 Identities = 128/210 (60%), Positives = 149/210 (70%), Gaps = 2/210 (0%) Frame = +1 Query: 1 LGRTGQRLENFAKSLGLRFQFHPXXXXXXXXXXXXXXXX--IALLPEETLVVNCVLYLHR 174 L RTG RL FA+SLGLRF FHP I LLP+E L VNCV YLHR Sbjct: 216 LHRTGDRLLKFAQSLGLRFHFHPLLLLNNDPTSLAHYLPSAITLLPDEALAVNCVSYLHR 275 Query: 175 LLNRSDEEVRLFLRTIKTLKPRMVTLAEREANFNNPIFSHRFLEALDHYTALFDSMEATI 354 L E+ LFL IK L P++VT+AEREAN N+P+F RFLEALDHYTALFDS+EAT+ Sbjct: 276 FLKDDSRELLLFLHKIKALNPKVVTVAEREANHNHPLFLQRFLEALDHYTALFDSLEATL 335 Query: 355 PPNNRERLAVEQVWFGREIMDVVAAEGXXXXXXXXXXQNWAEKMRRSGFSNVPLSPFAVS 534 PPN+RERLAVEQ+WFGREIMD+VAAEG + W ++ GF VPLSPFA+S Sbjct: 336 PPNSRERLAVEQIWFGREIMDIVAAEGEGRRERHQRFETWEMMLKSVGFIKVPLSPFALS 395 Query: 535 QAKLVLRLHYPSEGYQLLILNDSLFLGWQN 624 QAKL+LRLHYPS+GYQL ILN+S FLGW+N Sbjct: 396 QAKLLLRLHYPSDGYQLQILNNSFFLGWRN 425