BLASTX nr result

ID: Coptis23_contig00038163 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038163
         (624 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265645.1| PREDICTED: scarecrow-like protein 18 [Vitis ...   262   3e-68
emb|CAN64763.1| hypothetical protein VITISV_015992 [Vitis vinifera]   262   3e-68
gb|AFH54535.1| GRAS family protein, partial [Dimocarpus longan]       259   2e-67
ref|XP_002321384.1| GRAS family transcription factor LATERAL [Po...   257   1e-66
ref|XP_002318447.1| GRAS family transcription factor LATERAL [Po...   253   2e-65

>ref|XP_002265645.1| PREDICTED: scarecrow-like protein 18 [Vitis vinifera]
           gi|296090051|emb|CBI39870.3| unnamed protein product
           [Vitis vinifera]
          Length = 413

 Score =  262 bits (670), Expect = 3e-68
 Identities = 128/209 (61%), Positives = 158/209 (75%), Gaps = 1/209 (0%)
 Frame = +1

Query: 1   LGRTGQRLENFAKSLGLRFQFHPXXXXXXXXXXXXXXXX-IALLPEETLVVNCVLYLHRL 177
           L RTG RL  FA+SLGL+FQFHP                 + LLP+ETL VNCVLYLHRL
Sbjct: 195 LQRTGDRLLKFAQSLGLKFQFHPLLLRNDPTSVPLYLPSALQLLPDETLAVNCVLYLHRL 254

Query: 178 LNRSDEEVRLFLRTIKTLKPRMVTLAEREANFNNPIFSHRFLEALDHYTALFDSMEATIP 357
           L     ++RLFL  IK ++P++VT+AEREAN N+P+F  RF+EALDHYTA+FDS+EAT+P
Sbjct: 255 LKDDSRDLRLFLHKIKAMEPKVVTIAEREANHNHPLFLQRFVEALDHYTAVFDSLEATLP 314

Query: 358 PNNRERLAVEQVWFGREIMDVVAAEGXXXXXXXXXXQNWAEKMRRSGFSNVPLSPFAVSQ 537
           P +RERLAVE++WFGREI+D+V+AEG          ++W   +R SGFSNVPLSPFA+SQ
Sbjct: 315 PTSRERLAVERIWFGREIVDIVSAEGDNRRERHERFESWEVMLRSSGFSNVPLSPFALSQ 374

Query: 538 AKLVLRLHYPSEGYQLLILNDSLFLGWQN 624
           AKL+LRLHYPSEGY+L I+NDS FLGWQN
Sbjct: 375 AKLLLRLHYPSEGYRLQIINDSFFLGWQN 403


>emb|CAN64763.1| hypothetical protein VITISV_015992 [Vitis vinifera]
          Length = 377

 Score =  262 bits (670), Expect = 3e-68
 Identities = 128/209 (61%), Positives = 158/209 (75%), Gaps = 1/209 (0%)
 Frame = +1

Query: 1   LGRTGQRLENFAKSLGLRFQFHPXXXXXXXXXXXXXXXX-IALLPEETLVVNCVLYLHRL 177
           L RTG RL  FA+SLGL+FQFHP                 + LLP+ETL VNCVLYLHRL
Sbjct: 159 LQRTGDRLLKFAQSLGLKFQFHPLLLRNDPTSVPLYLPSALQLLPDETLAVNCVLYLHRL 218

Query: 178 LNRSDEEVRLFLRTIKTLKPRMVTLAEREANFNNPIFSHRFLEALDHYTALFDSMEATIP 357
           L     ++RLFL  IK ++P++VT+AEREAN N+P+F  RF+EALDHYTA+FDS+EAT+P
Sbjct: 219 LKDDSRDLRLFLHKIKAMEPKVVTIAEREANHNHPLFLQRFVEALDHYTAVFDSLEATLP 278

Query: 358 PNNRERLAVEQVWFGREIMDVVAAEGXXXXXXXXXXQNWAEKMRRSGFSNVPLSPFAVSQ 537
           P +RERLAVE++WFGREI+D+V+AEG          ++W   +R SGFSNVPLSPFA+SQ
Sbjct: 279 PTSRERLAVERIWFGREIVDIVSAEGDNRRERHERFESWEVMLRSSGFSNVPLSPFALSQ 338

Query: 538 AKLVLRLHYPSEGYQLLILNDSLFLGWQN 624
           AKL+LRLHYPSEGY+L I+NDS FLGWQN
Sbjct: 339 AKLLLRLHYPSEGYRLQIINDSFFLGWQN 367


>gb|AFH54535.1| GRAS family protein, partial [Dimocarpus longan]
          Length = 449

 Score =  259 bits (663), Expect = 2e-67
 Identities = 126/210 (60%), Positives = 157/210 (74%), Gaps = 2/210 (0%)
 Frame = +1

Query: 1   LGRTGQRLENFAKSLGLRFQFHPXXXXXXXXXXXXXXXX--IALLPEETLVVNCVLYLHR 174
           L RTG RL  FA+SLGLRFQFHP                  ++LLP+E L VNCVLYLHR
Sbjct: 230 LHRTGDRLFMFAQSLGLRFQFHPLLLLNDDPTSVAVYLSSALSLLPDEALAVNCVLYLHR 289

Query: 175 LLNRSDEEVRLFLRTIKTLKPRMVTLAEREANFNNPIFSHRFLEALDHYTALFDSMEATI 354
           L+     ++RLFL  IK+L P +VT+AEREAN N+P+F  RF+EALDHY+A+++S+EAT+
Sbjct: 290 LVKEDSRDLRLFLHKIKSLNPAVVTIAEREANHNHPVFMRRFVEALDHYSAIYESLEATL 349

Query: 355 PPNNRERLAVEQVWFGREIMDVVAAEGXXXXXXXXXXQNWAEKMRRSGFSNVPLSPFAVS 534
           PPN++ERLAVEQ+WFGREIMD+V AEG          ++W   +R SGF+NVPLSPFA+S
Sbjct: 350 PPNSKERLAVEQIWFGREIMDIVGAEGENRRERHERLESWEVMLRSSGFANVPLSPFALS 409

Query: 535 QAKLVLRLHYPSEGYQLLILNDSLFLGWQN 624
           QAKL+LRLHYPSEGYQ+ ILN+S FLGWQN
Sbjct: 410 QAKLLLRLHYPSEGYQIQILNNSFFLGWQN 439


>ref|XP_002321384.1| GRAS family transcription factor LATERAL [Populus trichocarpa]
           gi|222868380|gb|EEF05511.1| GRAS family transcription
           factor LATERAL [Populus trichocarpa]
          Length = 434

 Score =  257 bits (656), Expect = 1e-66
 Identities = 130/210 (61%), Positives = 149/210 (70%), Gaps = 2/210 (0%)
 Frame = +1

Query: 1   LGRTGQRLENFAKSLGLRFQFHPXXXXXXXXXXXXXXXX--IALLPEETLVVNCVLYLHR 174
           L RTG RL  FA+SLGLRFQFHP                  I LLP+E L VNCVLYLHR
Sbjct: 215 LHRTGDRLLKFAQSLGLRFQFHPLLLLNNDPTTLALYLPSAITLLPDEALAVNCVLYLHR 274

Query: 175 LLNRSDEEVRLFLRTIKTLKPRMVTLAEREANFNNPIFSHRFLEALDHYTALFDSMEATI 354
            L     E+ LFL  IK L P++VT+AEREAN N P+F  RFLEALDHY ALFDS+EAT+
Sbjct: 275 FLKDDSRELLLFLHKIKALNPKVVTVAEREANHNQPLFLQRFLEALDHYKALFDSLEATL 334

Query: 355 PPNNRERLAVEQVWFGREIMDVVAAEGXXXXXXXXXXQNWAEKMRRSGFSNVPLSPFAVS 534
           PPNNRERLAVEQ+WFGREI+D+VAAEG          + W   ++  GF+ VPLSPFA+S
Sbjct: 335 PPNNRERLAVEQIWFGREILDIVAAEGEGRRERHQKFETWEMMLKSVGFNKVPLSPFALS 394

Query: 535 QAKLVLRLHYPSEGYQLLILNDSLFLGWQN 624
           QAKL+LRLHYPSEGYQL IL +S FLGWQN
Sbjct: 395 QAKLLLRLHYPSEGYQLQILKNSFFLGWQN 424


>ref|XP_002318447.1| GRAS family transcription factor LATERAL [Populus trichocarpa]
           gi|222859120|gb|EEE96667.1| GRAS family transcription
           factor LATERAL [Populus trichocarpa]
          Length = 435

 Score =  253 bits (646), Expect = 2e-65
 Identities = 128/210 (60%), Positives = 149/210 (70%), Gaps = 2/210 (0%)
 Frame = +1

Query: 1   LGRTGQRLENFAKSLGLRFQFHPXXXXXXXXXXXXXXXX--IALLPEETLVVNCVLYLHR 174
           L RTG RL  FA+SLGLRF FHP                  I LLP+E L VNCV YLHR
Sbjct: 216 LHRTGDRLLKFAQSLGLRFHFHPLLLLNNDPTSLAHYLPSAITLLPDEALAVNCVSYLHR 275

Query: 175 LLNRSDEEVRLFLRTIKTLKPRMVTLAEREANFNNPIFSHRFLEALDHYTALFDSMEATI 354
            L     E+ LFL  IK L P++VT+AEREAN N+P+F  RFLEALDHYTALFDS+EAT+
Sbjct: 276 FLKDDSRELLLFLHKIKALNPKVVTVAEREANHNHPLFLQRFLEALDHYTALFDSLEATL 335

Query: 355 PPNNRERLAVEQVWFGREIMDVVAAEGXXXXXXXXXXQNWAEKMRRSGFSNVPLSPFAVS 534
           PPN+RERLAVEQ+WFGREIMD+VAAEG          + W   ++  GF  VPLSPFA+S
Sbjct: 336 PPNSRERLAVEQIWFGREIMDIVAAEGEGRRERHQRFETWEMMLKSVGFIKVPLSPFALS 395

Query: 535 QAKLVLRLHYPSEGYQLLILNDSLFLGWQN 624
           QAKL+LRLHYPS+GYQL ILN+S FLGW+N
Sbjct: 396 QAKLLLRLHYPSDGYQLQILNNSFFLGWRN 425


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