BLASTX nr result

ID: Coptis23_contig00038160 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038160
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281670.1| PREDICTED: importin subunit alpha-1 [Vitis v...   166   1e-39
emb|CAN64716.1| hypothetical protein VITISV_026717 [Vitis vinifera]   166   1e-39
ref|XP_004144743.1| PREDICTED: importin subunit alpha-1-like [Cu...   160   1e-37
gb|ACU56981.1| importin alpha [Citrus sinensis]                       159   2e-37
gb|AAK38726.1|AF369706_1 importin alpha 1 [Capsicum annuum]           158   4e-37

>ref|XP_002281670.1| PREDICTED: importin subunit alpha-1 [Vitis vinifera]
           gi|296089795|emb|CBI39614.3| unnamed protein product
           [Vitis vinifera]
          Length = 535

 Score =  166 bits (421), Expect = 1e-39
 Identities = 82/88 (93%), Positives = 85/88 (96%)
 Frame = -2

Query: 264 KIQAVIEAGVCPRLVELLLHQSSTVLVPALRTVGNIVTGDDAQTQFVIDNQVLPCLYQLL 85
           KIQAV+EAGVCPRLVELLLH S TVL+PALRTVGNIVTGDDAQTQFVIDNQVLPCLYQLL
Sbjct: 280 KIQAVLEAGVCPRLVELLLHPSPTVLIPALRTVGNIVTGDDAQTQFVIDNQVLPCLYQLL 339

Query: 84  TQPYKKSIKKEACWTISNITAGNKGQIQ 1
           TQ +KKSIKKEACWTISNITAGNKGQIQ
Sbjct: 340 TQNHKKSIKKEACWTISNITAGNKGQIQ 367


>emb|CAN64716.1| hypothetical protein VITISV_026717 [Vitis vinifera]
          Length = 523

 Score =  166 bits (421), Expect = 1e-39
 Identities = 82/88 (93%), Positives = 85/88 (96%)
 Frame = -2

Query: 264 KIQAVIEAGVCPRLVELLLHQSSTVLVPALRTVGNIVTGDDAQTQFVIDNQVLPCLYQLL 85
           KIQAV+EAGVCPRLVELLLH S TVL+PALRTVGNIVTGDDAQTQFVIDNQVLPCLYQLL
Sbjct: 268 KIQAVLEAGVCPRLVELLLHPSPTVLIPALRTVGNIVTGDDAQTQFVIDNQVLPCLYQLL 327

Query: 84  TQPYKKSIKKEACWTISNITAGNKGQIQ 1
           TQ +KKSIKKEACWTISNITAGNKGQIQ
Sbjct: 328 TQNHKKSIKKEACWTISNITAGNKGQIQ 355


>ref|XP_004144743.1| PREDICTED: importin subunit alpha-1-like [Cucumis sativus]
           gi|449490806|ref|XP_004158712.1| PREDICTED: importin
           subunit alpha-1-like [Cucumis sativus]
          Length = 537

 Score =  160 bits (405), Expect = 1e-37
 Identities = 81/88 (92%), Positives = 84/88 (95%)
 Frame = -2

Query: 264 KIQAVIEAGVCPRLVELLLHQSSTVLVPALRTVGNIVTGDDAQTQFVIDNQVLPCLYQLL 85
           KIQAVIEAGVCPRLVELLLHQS +VLVPALRTVGNIVTGDDAQTQFVIDNQVLP LYQLL
Sbjct: 279 KIQAVIEAGVCPRLVELLLHQSPSVLVPALRTVGNIVTGDDAQTQFVIDNQVLPNLYQLL 338

Query: 84  TQPYKKSIKKEACWTISNITAGNKGQIQ 1
           TQ +KKSIKKEACWTISNITAGN+ QIQ
Sbjct: 339 TQNHKKSIKKEACWTISNITAGNRAQIQ 366


>gb|ACU56981.1| importin alpha [Citrus sinensis]
          Length = 535

 Score =  159 bits (402), Expect = 2e-37
 Identities = 78/88 (88%), Positives = 83/88 (94%)
 Frame = -2

Query: 264 KIQAVIEAGVCPRLVELLLHQSSTVLVPALRTVGNIVTGDDAQTQFVIDNQVLPCLYQLL 85
           KIQAVIEAGVCPRLVELL+H S+TVL+PALRTVGNIVTGDDAQTQFVIDN VLPCLYQLL
Sbjct: 278 KIQAVIEAGVCPRLVELLMHPSATVLIPALRTVGNIVTGDDAQTQFVIDNGVLPCLYQLL 337

Query: 84  TQPYKKSIKKEACWTISNITAGNKGQIQ 1
           T  +KKSIKKEACWTISNITAGN+ QIQ
Sbjct: 338 THNHKKSIKKEACWTISNITAGNRAQIQ 365


>gb|AAK38726.1|AF369706_1 importin alpha 1 [Capsicum annuum]
          Length = 535

 Score =  158 bits (400), Expect = 4e-37
 Identities = 77/88 (87%), Positives = 83/88 (94%)
 Frame = -2

Query: 264 KIQAVIEAGVCPRLVELLLHQSSTVLVPALRTVGNIVTGDDAQTQFVIDNQVLPCLYQLL 85
           KIQAVI+AGVCPRLVELLLH S TVL+PALRT GNIVTGDDAQTQ+VIDN+VLPCLYQLL
Sbjct: 280 KIQAVIDAGVCPRLVELLLHPSPTVLIPALRTAGNIVTGDDAQTQYVIDNRVLPCLYQLL 339

Query: 84  TQPYKKSIKKEACWTISNITAGNKGQIQ 1
           TQ +KKSIKKEACWTISNITAGN+ QIQ
Sbjct: 340 TQNHKKSIKKEACWTISNITAGNRAQIQ 367


Top