BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038158
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278969.2| PREDICTED: guanine nucleotide-binding protei...    91   8e-17
ref|XP_002522320.1| conserved hypothetical protein [Ricinus comm...    79   5e-13
ref|XP_002313556.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_002867384.1| EMB2757 [Arabidopsis lyrata subsp. lyrata] g...    76   3e-12
ref|NP_194715.2| transducin/WD40 domain-containing protein [Arab...    73   3e-11

>ref|XP_002278969.2| PREDICTED: guanine nucleotide-binding protein subunit beta-like
           protein 1 homolog [Vitis vinifera]
           gi|302142603|emb|CBI19806.3| unnamed protein product
           [Vitis vinifera]
          Length = 382

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 45/106 (42%), Positives = 68/106 (64%), Gaps = 1/106 (0%)
 Frame = -3

Query: 317 TVKYWDIQDGGLSRMPCVTIRTNSYHFCKLSLVKKPSTCLVQSENILSVDSQLDSSTEYN 138
           TVKYWDI++GGLSR P +TI+TN+YHFCKLSL+KKP  C  Q+E             ++ 
Sbjct: 86  TVKYWDIEEGGLSRSPSLTIKTNAYHFCKLSLMKKPCACARQAE-----------GPKHY 134

Query: 137 YNLKSRETIDAELCEGAHREAGQD-DQLEDFVPTEGTQYIAIAGEK 3
           +++  ++T+DAE+   +  +A +   +  D    EG +Y+AIAGE+
Sbjct: 135 HDMDVKDTVDAEMLNDSSGKAQESLTECSDAAHAEGPKYVAIAGEQ 180


>ref|XP_002522320.1| conserved hypothetical protein [Ricinus communis]
           gi|223538398|gb|EEF40004.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 441

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 46/110 (41%), Positives = 61/110 (55%), Gaps = 5/110 (4%)
 Frame = -3

Query: 317 TVKYWDIQDGGLSRMPCVTIRTNSYHFCKLSLVKKPSTCLVQSENILSVDSQLDSSTEYN 138
           TVK WDIQ+GGLSR+P VTIRTNSYHFCKLSLVKKP   +V            D    + 
Sbjct: 87  TVKLWDIQEGGLSRVPVVTIRTNSYHFCKLSLVKKPGDKVVH-----------DKGPNHQ 135

Query: 137 YNLKSRETIDAELC---EGAHREAGQ--DDQLEDFVPTEGTQYIAIAGEK 3
           + +++ ET+D  +    E  H E         E+    +  + +AIAGE+
Sbjct: 136 HEIEALETVDTNVSYDRENRHNENSSKCSSDSEEDKHIDVLKCVAIAGEQ 185


>ref|XP_002313556.1| predicted protein [Populus trichocarpa] gi|222849964|gb|EEE87511.1|
           predicted protein [Populus trichocarpa]
          Length = 387

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 46/110 (41%), Positives = 64/110 (58%), Gaps = 5/110 (4%)
 Frame = -3

Query: 317 TVKYWDIQDGGLSRMPCVTIRTNSYHFCKLSLVKKPSTCLVQSENILSVDSQLDSSTEYN 138
           TVK WDI +GGLSR P +TI+TN+YHFCKLSLVKKP++ + Q E              Y 
Sbjct: 86  TVKCWDIDNGGLSREPSLTIKTNAYHFCKLSLVKKPNSSVRQGE-----------GPNYK 134

Query: 137 YNLKSRETIDAELC--EGAHREAGQ---DDQLEDFVPTEGTQYIAIAGEK 3
           +     ET+D      +G + E       + LED +  +G++YIA+AGE+
Sbjct: 135 HEKDDTETVDTNSLGNKGINYEEDPVECSNPLED-LHADGSKYIAVAGEQ 183


>ref|XP_002867384.1| EMB2757 [Arabidopsis lyrata subsp. lyrata]
           gi|297313220|gb|EFH43643.1| EMB2757 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 386

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 41/106 (38%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
 Frame = -3

Query: 317 TVKYWDIQDGGLSRMPCVTIRTNSYHFCKLSLVKKPSTCLVQS-ENILSVDSQLDSSTEY 141
           TVK WDI+DGGLSR P + + T++YHFCK SLVKKP T L ++  ++ + D Q D  T  
Sbjct: 86  TVKCWDIEDGGLSRDPLLILETSAYHFCKFSLVKKPKTSLQEAVSHLQNCDEQDDGDTR- 144

Query: 140 NYNLKSRETIDAELCEGAHREAGQDDQLEDFVPTEGTQYIAIAGEK 3
                       +L + + R       L+D    EGT ++A+ GE+
Sbjct: 145 ----------SVQLGDDSERSVEDSGLLQDGDHAEGTTFVAVVGEQ 180


>ref|NP_194715.2| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
           gi|75674124|dbj|BAE44475.1| WD repeat protein
           [Arabidopsis thaliana] gi|332660286|gb|AEE85686.1|
           transducin/WD40 domain-containing protein [Arabidopsis
           thaliana]
          Length = 386

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 38/105 (36%), Positives = 57/105 (54%)
 Frame = -3

Query: 317 TVKYWDIQDGGLSRMPCVTIRTNSYHFCKLSLVKKPSTCLVQSENILSVDSQLDSSTEYN 138
           TVK WDI+DGGLSR P + + T +YHFCK SLVKKP   L ++E+      + D      
Sbjct: 86  TVKCWDIEDGGLSRDPLLILETCAYHFCKFSLVKKPKNSLQEAESHSRGCDEQDGG---- 141

Query: 137 YNLKSRETIDAELCEGAHREAGQDDQLEDFVPTEGTQYIAIAGEK 3
                 +T + ++ + + R       L+D    EGT ++A+ GE+
Sbjct: 142 ------DTCNVQIADDSERSEEDSGLLQDKDHAEGTTFVAVVGEQ 180