BLASTX nr result

ID: Coptis23_contig00038152 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038152
         (627 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512053.1| conserved hypothetical protein [Ricinus comm...   182   4e-44
ref|XP_002263547.1| PREDICTED: uncharacterized protein LOC100266...   181   1e-43
ref|XP_002312293.1| predicted protein [Populus trichocarpa] gi|2...   157   2e-36
ref|XP_002314995.1| predicted protein [Populus trichocarpa] gi|2...   147   2e-33
ref|XP_003520129.1| PREDICTED: uncharacterized protein LOC100775...   124   1e-26

>ref|XP_002512053.1| conserved hypothetical protein [Ricinus communis]
           gi|223549233|gb|EEF50722.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 324

 Score =  182 bits (462), Expect = 4e-44
 Identities = 94/156 (60%), Positives = 112/156 (71%), Gaps = 5/156 (3%)
 Frame = -1

Query: 627 SSTASGFRTPPSYVITPTKGYKDLRSYSDQRHVVSLPRYTEKVKSPSSQENNFDEKKNMD 448
           SS++SGFRTPP Y  TPTK YKDLRSYSD + V+SL      VKS   Q    DEKK  D
Sbjct: 166 SSSSSGFRTPPPYANTPTKSYKDLRSYSDHKQVISLSMQNGNVKSTGLQNEVLDEKKKTD 225

Query: 447 ITWLDEKFTFIDELDKKDKNVFN-----KDRICVDNFLSSQKKNVKSLEVDDGGESDASS 283
           ++WLDEKF   D L +K KN+ N     KDRI VD + S +K   K  EVDDG +SD+SS
Sbjct: 226 LSWLDEKFKISDALSEKTKNLGNHRYLEKDRIWVDQYPSEEKGFRKFDEVDDGADSDSSS 285

Query: 282 DLFELENYDLGVYSSDLPVYETTHMENIKRGAPISN 175
           DLFEL+NYDLG+YSS LPVYETT+M++IK+GAPISN
Sbjct: 286 DLFELQNYDLGIYSSGLPVYETTNMDSIKKGAPISN 321


>ref|XP_002263547.1| PREDICTED: uncharacterized protein LOC100266436 [Vitis vinifera]
          Length = 323

 Score =  181 bits (459), Expect = 1e-43
 Identities = 96/159 (60%), Positives = 112/159 (70%), Gaps = 5/159 (3%)
 Frame = -1

Query: 627 SSTASGFRTPPSYVITPTKGYKDLRSYSDQRHVVSLPRYTE-KVKSPSSQENNFDEKKNM 451
           SS++SGFRTPP Y  TPTK YKDLRSYSD R VVSLP Y    VK+   +    DEK+  
Sbjct: 163 SSSSSGFRTPPPYANTPTKTYKDLRSYSDHRQVVSLPNYNNGNVKATGLRNEALDEKRIK 222

Query: 450 DITWLDEKFTFIDELDKKDKNVFN----KDRICVDNFLSSQKKNVKSLEVDDGGESDASS 283
           ++ WLDEKF F     +K KN  N    KDRI VD + S +K+  K  E+D G ESD+SS
Sbjct: 223 ELVWLDEKFKFSSGFSEKHKNFSNGLSEKDRIWVDEYPSEEKEFRKLDEIDAGAESDSSS 282

Query: 282 DLFELENYDLGVYSSDLPVYETTHMENIKRGAPISN*PL 166
           DLFEL+NYDLG YSS LPVYETTHM++IKRGAPISN PL
Sbjct: 283 DLFELQNYDLGCYSSGLPVYETTHMDSIKRGAPISNGPL 321


>ref|XP_002312293.1| predicted protein [Populus trichocarpa] gi|222852113|gb|EEE89660.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score =  157 bits (396), Expect = 2e-36
 Identities = 89/159 (55%), Positives = 110/159 (69%), Gaps = 8/159 (5%)
 Frame = -1

Query: 627 SSTASGFRTPPSYVITPTKGYKDLRSYSDQRHVVSLPRYTEKVKSPSSQENNFDEKKNMD 448
           SS++SGF TPP Y  TPTKGYK+ RS SD R +VSLP+    VKS + +    D+KKN D
Sbjct: 168 SSSSSGFMTPPPYTHTPTKGYKEFRSCSDHRQIVSLPKQNGIVKSIAFRNEILDDKKNTD 227

Query: 447 ITWLDEKFTFIDEL--DKKDKNVFN----KDRICVDNFLSSQKKNVKSLEVDDGGESDAS 286
           ++WL+EK+ F D     K  +N  N    KDR  VD + S +K+  K  EVDDG ESD+S
Sbjct: 228 LSWLEEKYKFNDGFSDQKVPRNRGNQHLEKDRTWVDQYPSEEKECRKFDEVDDGTESDSS 287

Query: 285 SDLFELENYDL-GVYSSDLPVYETTHMENIKRGA-PISN 175
           SDLFEL+NYDL G YS+ LPVYETT M++IKRGA PISN
Sbjct: 288 SDLFELQNYDLAGTYSNGLPVYETTRMDSIKRGAVPISN 326


>ref|XP_002314995.1| predicted protein [Populus trichocarpa] gi|222864035|gb|EEF01166.1|
           predicted protein [Populus trichocarpa]
          Length = 330

 Score =  147 bits (370), Expect = 2e-33
 Identities = 80/160 (50%), Positives = 104/160 (65%), Gaps = 9/160 (5%)
 Frame = -1

Query: 627 SSTASGFRTPPSYVITPTKGYKDLRSYSDQRHVVSLPRYTEKVKSPSSQENNFDEKKNMD 448
           SS++SGFRTP  Y   PTKG K+ RSYSD + +VSL +    VKS + Q    D+KK   
Sbjct: 168 SSSSSGFRTPSPYTHPPTKGCKESRSYSDHKQIVSLSKQNGTVKSTTFQNEISDDKKKSG 227

Query: 447 ITWLDEKFTFIDELDKKDKNVFN-------KDRICVDNFLSSQKKNVKSL-EVDDGGESD 292
            +WL+E++ F+++     K   N       KDR  VD    S++   +   EVDDG ESD
Sbjct: 228 FSWLEERYKFVNDGFSDQKAAKNRGNQYLEKDRTWVDEHYRSEENEFRKFNEVDDGAESD 287

Query: 291 ASSDLFELENYDLGVYSSDLPVYETTHMENIKRGA-PISN 175
           +SSDLFEL+N DLG+YS+ LPVYETTHM++IKRGA PISN
Sbjct: 288 SSSDLFELQNCDLGIYSNGLPVYETTHMDSIKRGAVPISN 327


>ref|XP_003520129.1| PREDICTED: uncharacterized protein LOC100775233 [Glycine max]
          Length = 355

 Score =  124 bits (311), Expect = 1e-26
 Identities = 85/188 (45%), Positives = 108/188 (57%), Gaps = 34/188 (18%)
 Frame = -1

Query: 627 SSTASGFRTPPSYVITPTKGYKDLRSYSDQ-RHVVSLPRYTEKVKSPSSQ---------- 481
           SS +SGFRTPP YV TPTK  K+ R++S + +H +S        K+ + Q          
Sbjct: 170 SSLSSGFRTPP-YVQTPTKSCKEFRTFSSENKHALSFSAKYNNNKNNNGQHVRSSTATTT 228

Query: 480 -ENNF--DEKKNMD----ITWLDEKFTFIDELDKKDKN---------VFNKDRICVDNFL 349
            +N F  DEKK  +     T LD+       L +K KN         +  KDR+ VDN  
Sbjct: 229 LQNEFLWDEKKKREPTTTTTLLDDNSNH-KHLSEKQKNNNNKGSHELLLEKDRMLVDNKY 287

Query: 348 SSQKK-------NVKSLEVDDGGESDASSDLFELENYDLGVYSSDLPVYETTHMENIKRG 190
           SS++K       N   + VDDG ESD+SSDLFEL+NYDL  YSS LPVYETT+M++IKRG
Sbjct: 288 SSEEKETTTQFKNFNEVVVDDGAESDSSSDLFELQNYDLRYYSSGLPVYETTNMDSIKRG 347

Query: 189 APISN*PL 166
           APISN PL
Sbjct: 348 APISNGPL 355


Top