BLASTX nr result

ID: Coptis23_contig00038148 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038148
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266225.1| PREDICTED: ATP-dependent DNA helicase Q-like...    48   2e-07
emb|CBI27562.3| unnamed protein product [Vitis vinifera]               48   3e-06

>ref|XP_002266225.1| PREDICTED: ATP-dependent DNA helicase Q-like 5-like [Vitis
           vinifera]
          Length = 941

 Score = 48.1 bits (113), Expect(2) = 2e-07
 Identities = 23/32 (71%), Positives = 26/32 (81%)
 Frame = -1

Query: 101 SDENFRKLLKLSHGSDSFRDGQLEAIKQVVEG 6
           SDE   KLL L+HG DSFRDGQLEAI+ V+EG
Sbjct: 287 SDEKLVKLLGLTHGYDSFRDGQLEAIRMVLEG 318



 Score = 31.6 bits (70), Expect(2) = 2e-07
 Identities = 17/32 (53%), Positives = 22/32 (68%)
 Frame = -2

Query: 196 VTENPKVKKQKEGVKFSEEMIEQAVLDVRNEA 101
           V E P ++KQ   VKF  E+IE A L+V+NEA
Sbjct: 256 VLETPTMEKQGR-VKFDGELIEAAALEVQNEA 286


>emb|CBI27562.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score = 48.1 bits (113), Expect(2) = 3e-06
 Identities = 23/32 (71%), Positives = 26/32 (81%)
 Frame = -1

Query: 101 SDENFRKLLKLSHGSDSFRDGQLEAIKQVVEG 6
           SDE   KLL L+HG DSFRDGQLEAI+ V+EG
Sbjct: 42  SDEKLVKLLGLTHGYDSFRDGQLEAIRMVLEG 73



 Score = 27.7 bits (60), Expect(2) = 3e-06
 Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = -2

Query: 181 KVKKQKEG-VKFSEEMIEQAVLDVRNEA 101
           +V   ++G VKF  E+IE A L+V+NEA
Sbjct: 14  RVTMHRQGRVKFDGELIEAAALEVQNEA 41


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