BLASTX nr result

ID: Coptis23_contig00038141 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038141
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134574.1| PREDICTED: probable beta-D-xylosidase 2-like...    96   5e-29
ref|XP_002519718.1| Beta-glucosidase, putative [Ricinus communis...    97   6e-28
emb|CAN72807.1| hypothetical protein VITISV_033721 [Vitis vinifera]    87   1e-27
ref|XP_002274651.1| PREDICTED: probable beta-D-xylosidase 5-like...    87   2e-27
emb|CBI25989.3| unnamed protein product [Vitis vinifera]               87   2e-27

>ref|XP_004134574.1| PREDICTED: probable beta-D-xylosidase 2-like [Cucumis sativus]
           gi|449530107|ref|XP_004172038.1| PREDICTED: probable
           beta-D-xylosidase 2-like [Cucumis sativus]
          Length = 812

 Score = 96.3 bits (238), Expect(2) = 5e-29
 Identities = 42/60 (70%), Positives = 49/60 (81%)
 Frame = +2

Query: 188 AAGVERLNLPAYEWWSEALHGVSDIGPGTRFDNITRAATSFPPVILTAASFNESLWKAIG 367
           A+GV+RL LP Y WWSEALHGVS++GPGT+FD +   ATSFP VI TA+SFNE LWK IG
Sbjct: 106 ASGVDRLGLPPYNWWSEALHGVSNVGPGTQFDKVVPGATSFPNVITTASSFNEDLWKTIG 165



 Score = 56.6 bits (135), Expect(2) = 5e-29
 Identities = 25/47 (53%), Positives = 31/47 (65%)
 Frame = +3

Query: 42  TIVCEVDDFRELGMDMKMLAFCDKSLPFRQRAKDLVDRMALEEKVAQ 182
           T VC+   + +LG+D     FCD SL F +RAKDL+DRM L EK AQ
Sbjct: 55  TFVCDPSRYDKLGLDFSSFGFCDSSLSFPERAKDLIDRMTLSEKAAQ 101


>ref|XP_002519718.1| Beta-glucosidase, putative [Ricinus communis]
           gi|223541135|gb|EEF42691.1| Beta-glucosidase, putative
           [Ricinus communis]
          Length = 802

 Score = 96.7 bits (239), Expect(2) = 6e-28
 Identities = 44/60 (73%), Positives = 48/60 (80%)
 Frame = +2

Query: 188 AAGVERLNLPAYEWWSEALHGVSDIGPGTRFDNITRAATSFPPVILTAASFNESLWKAIG 367
           A GV RL +P YEWWSEALHGVSD+GPGT FD++   ATSFP  ILT ASFNESLWK IG
Sbjct: 99  AYGVPRLGIPKYEWWSEALHGVSDVGPGTFFDDLVPGATSFPTTILTTASFNESLWKNIG 158



 Score = 52.4 bits (124), Expect(2) = 6e-28
 Identities = 24/47 (51%), Positives = 31/47 (65%)
 Frame = +3

Query: 42  TIVCEVDDFRELGMDMKMLAFCDKSLPFRQRAKDLVDRMALEEKVAQ 182
           T VC+   +  LG+DM    FCD SL +  RAKDLV++M L+EKV Q
Sbjct: 48  TYVCDSSRYDNLGLDMTTFGFCDSSLSYEVRAKDLVNQMTLKEKVQQ 94


>emb|CAN72807.1| hypothetical protein VITISV_033721 [Vitis vinifera]
          Length = 236

 Score = 87.0 bits (214), Expect(2) = 1e-27
 Identities = 37/60 (61%), Positives = 46/60 (76%)
 Frame = +2

Query: 188 AAGVERLNLPAYEWWSEALHGVSDIGPGTRFDNITRAATSFPPVILTAASFNESLWKAIG 367
           A+GV RL LP Y WWSEALHG+S++GPG  FD     ATSFP VIL+ A+FN++LWK +G
Sbjct: 67  ASGVRRLGLPEYSWWSEALHGISNLGPGVFFDETIPGATSFPTVILSTAAFNQTLWKTLG 126



 Score = 60.8 bits (146), Expect(2) = 1e-27
 Identities = 28/48 (58%), Positives = 35/48 (72%)
 Frame = +3

Query: 42  TIVCEVDDFRELGMDMKMLAFCDKSLPFRQRAKDLVDRMALEEKVAQT 185
           T VC+   +  LG+DMK  AFCDKSL + +RAKDLV RM L+EKV Q+
Sbjct: 16  TYVCDESRYALLGLDMKSFAFCDKSLSYEERAKDLVSRMTLQEKVMQS 63


>ref|XP_002274651.1| PREDICTED: probable beta-D-xylosidase 5-like [Vitis vinifera]
          Length = 809

 Score = 87.4 bits (215), Expect(2) = 2e-27
 Identities = 39/62 (62%), Positives = 48/62 (77%)
 Frame = +2

Query: 182 NKAAGVERLNLPAYEWWSEALHGVSDIGPGTRFDNITRAATSFPPVILTAASFNESLWKA 361
           ++A+GVER+ LP Y WWSEALHGVS+ G    FD +   ATSFP VIL+AASFN+SLWK 
Sbjct: 99  DQASGVERIGLPKYNWWSEALHGVSNFGRCVFFDEVVPGATSFPTVILSAASFNQSLWKT 158

Query: 362 IG 367
           +G
Sbjct: 159 LG 160



 Score = 59.7 bits (143), Expect(2) = 2e-27
 Identities = 29/51 (56%), Positives = 33/51 (64%)
 Frame = +3

Query: 42  TIVCEVDDFRELGMDMKMLAFCDKSLPFRQRAKDLVDRMALEEKVAQTKPQ 194
           T VC+   F  LG+DMK   +CD S P+  RAKDLVDRM L EKV QT  Q
Sbjct: 50  TYVCDESRFAALGLDMKDFHYCDSSSPYEVRAKDLVDRMTLSEKVMQTGDQ 100


>emb|CBI25989.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score = 87.4 bits (215), Expect(2) = 2e-27
 Identities = 39/62 (62%), Positives = 48/62 (77%)
 Frame = +2

Query: 182 NKAAGVERLNLPAYEWWSEALHGVSDIGPGTRFDNITRAATSFPPVILTAASFNESLWKA 361
           ++A+GVER+ LP Y WWSEALHGVS+ G    FD +   ATSFP VIL+AASFN+SLWK 
Sbjct: 99  DQASGVERIGLPKYNWWSEALHGVSNFGRCVFFDEVVPGATSFPTVILSAASFNQSLWKT 158

Query: 362 IG 367
           +G
Sbjct: 159 LG 160



 Score = 59.7 bits (143), Expect(2) = 2e-27
 Identities = 29/51 (56%), Positives = 33/51 (64%)
 Frame = +3

Query: 42  TIVCEVDDFRELGMDMKMLAFCDKSLPFRQRAKDLVDRMALEEKVAQTKPQ 194
           T VC+   F  LG+DMK   +CD S P+  RAKDLVDRM L EKV QT  Q
Sbjct: 50  TYVCDESRFAALGLDMKDFHYCDSSSPYEVRAKDLVDRMTLSEKVMQTGDQ 100


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