BLASTX nr result
ID: Coptis23_contig00038134
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00038134 (307 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004158660.1| PREDICTED: LOW QUALITY PROTEIN: protein CHUP... 118 6e-25 ref|XP_004134549.1| PREDICTED: protein CHUP1, chloroplastic-like... 118 6e-25 ref|XP_002533785.1| actin binding protein, putative [Ricinus com... 117 1e-24 ref|XP_002317077.1| predicted protein [Populus trichocarpa] gi|2... 117 1e-24 ref|XP_002268607.1| PREDICTED: protein CHUP1, chloroplastic-like... 115 3e-24 >ref|XP_004158660.1| PREDICTED: LOW QUALITY PROTEIN: protein CHUP1, chloroplastic-like [Cucumis sativus] Length = 787 Score = 118 bits (295), Expect = 6e-25 Identities = 59/76 (77%), Positives = 66/76 (86%) Frame = -1 Query: 238 KFSIRTSTDKVQRAPQVVEFYHSLMKRDSRKDSAGEGVCGASSVANVRSSMIDEIENRSS 59 KFS+R++T VQRAPQVVEFYHSLMKRDSRKDS+ +C V+NVRSSMI EIENRSS Sbjct: 508 KFSVRSATGMVQRAPQVVEFYHSLMKRDSRKDSSNGTICNVPDVSNVRSSMIGEIENRSS 567 Query: 58 YLLAIKADIETQGEFV 11 +LLAIKADIETQGEFV Sbjct: 568 HLLAIKADIETQGEFV 583 >ref|XP_004134549.1| PREDICTED: protein CHUP1, chloroplastic-like [Cucumis sativus] Length = 787 Score = 118 bits (295), Expect = 6e-25 Identities = 59/76 (77%), Positives = 66/76 (86%) Frame = -1 Query: 238 KFSIRTSTDKVQRAPQVVEFYHSLMKRDSRKDSAGEGVCGASSVANVRSSMIDEIENRSS 59 KFS+R++T VQRAPQVVEFYHSLMKRDSRKDS+ +C V+NVRSSMI EIENRSS Sbjct: 508 KFSVRSATGMVQRAPQVVEFYHSLMKRDSRKDSSNGTICNVPDVSNVRSSMIGEIENRSS 567 Query: 58 YLLAIKADIETQGEFV 11 +LLAIKADIETQGEFV Sbjct: 568 HLLAIKADIETQGEFV 583 >ref|XP_002533785.1| actin binding protein, putative [Ricinus communis] gi|223526286|gb|EEF28598.1| actin binding protein, putative [Ricinus communis] Length = 791 Score = 117 bits (293), Expect = 1e-24 Identities = 62/77 (80%), Positives = 69/77 (89%), Gaps = 1/77 (1%) Frame = -1 Query: 238 KFSIRTST-DKVQRAPQVVEFYHSLMKRDSRKDSAGEGVCGASSVANVRSSMIDEIENRS 62 KFS+R+S+ VQRAPQVVEFYHSLMKRDSRK+S+ GVC AS VANVRSSMI EIENRS Sbjct: 511 KFSMRSSSAGVVQRAPQVVEFYHSLMKRDSRKESSNGGVCEASDVANVRSSMIGEIENRS 570 Query: 61 SYLLAIKADIETQGEFV 11 S+LLAIKAD+ETQGEFV Sbjct: 571 SHLLAIKADVETQGEFV 587 >ref|XP_002317077.1| predicted protein [Populus trichocarpa] gi|222860142|gb|EEE97689.1| predicted protein [Populus trichocarpa] Length = 794 Score = 117 bits (293), Expect = 1e-24 Identities = 61/77 (79%), Positives = 69/77 (89%), Gaps = 1/77 (1%) Frame = -1 Query: 238 KFSIRTST-DKVQRAPQVVEFYHSLMKRDSRKDSAGEGVCGASSVANVRSSMIDEIENRS 62 KFS+R++T VQRAPQVVEFYHSLMKRDSRK+S+ G+C AS VANVRS+MI EIENRS Sbjct: 512 KFSVRSTTAGVVQRAPQVVEFYHSLMKRDSRKESSNGGICEASDVANVRSNMIGEIENRS 571 Query: 61 SYLLAIKADIETQGEFV 11 S+LLAIKADIETQGEFV Sbjct: 572 SHLLAIKADIETQGEFV 588 >ref|XP_002268607.1| PREDICTED: protein CHUP1, chloroplastic-like [Vitis vinifera] Length = 801 Score = 115 bits (289), Expect = 3e-24 Identities = 59/76 (77%), Positives = 65/76 (85%) Frame = -1 Query: 238 KFSIRTSTDKVQRAPQVVEFYHSLMKRDSRKDSAGEGVCGASSVANVRSSMIDEIENRSS 59 KFS R++T VQRAPQVVEFYHSLMKRDSRKDS+ G+ VANVRS+MI EIENRSS Sbjct: 507 KFSARSTTGIVQRAPQVVEFYHSLMKRDSRKDSSNGGIYDTPDVANVRSNMIGEIENRSS 566 Query: 58 YLLAIKADIETQGEFV 11 YLLAIKAD+ETQGEFV Sbjct: 567 YLLAIKADVETQGEFV 582