BLASTX nr result

ID: Coptis23_contig00038134 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038134
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004158660.1| PREDICTED: LOW QUALITY PROTEIN: protein CHUP...   118   6e-25
ref|XP_004134549.1| PREDICTED: protein CHUP1, chloroplastic-like...   118   6e-25
ref|XP_002533785.1| actin binding protein, putative [Ricinus com...   117   1e-24
ref|XP_002317077.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
ref|XP_002268607.1| PREDICTED: protein CHUP1, chloroplastic-like...   115   3e-24

>ref|XP_004158660.1| PREDICTED: LOW QUALITY PROTEIN: protein CHUP1, chloroplastic-like
           [Cucumis sativus]
          Length = 787

 Score =  118 bits (295), Expect = 6e-25
 Identities = 59/76 (77%), Positives = 66/76 (86%)
 Frame = -1

Query: 238 KFSIRTSTDKVQRAPQVVEFYHSLMKRDSRKDSAGEGVCGASSVANVRSSMIDEIENRSS 59
           KFS+R++T  VQRAPQVVEFYHSLMKRDSRKDS+   +C    V+NVRSSMI EIENRSS
Sbjct: 508 KFSVRSATGMVQRAPQVVEFYHSLMKRDSRKDSSNGTICNVPDVSNVRSSMIGEIENRSS 567

Query: 58  YLLAIKADIETQGEFV 11
           +LLAIKADIETQGEFV
Sbjct: 568 HLLAIKADIETQGEFV 583


>ref|XP_004134549.1| PREDICTED: protein CHUP1, chloroplastic-like [Cucumis sativus]
          Length = 787

 Score =  118 bits (295), Expect = 6e-25
 Identities = 59/76 (77%), Positives = 66/76 (86%)
 Frame = -1

Query: 238 KFSIRTSTDKVQRAPQVVEFYHSLMKRDSRKDSAGEGVCGASSVANVRSSMIDEIENRSS 59
           KFS+R++T  VQRAPQVVEFYHSLMKRDSRKDS+   +C    V+NVRSSMI EIENRSS
Sbjct: 508 KFSVRSATGMVQRAPQVVEFYHSLMKRDSRKDSSNGTICNVPDVSNVRSSMIGEIENRSS 567

Query: 58  YLLAIKADIETQGEFV 11
           +LLAIKADIETQGEFV
Sbjct: 568 HLLAIKADIETQGEFV 583


>ref|XP_002533785.1| actin binding protein, putative [Ricinus communis]
           gi|223526286|gb|EEF28598.1| actin binding protein,
           putative [Ricinus communis]
          Length = 791

 Score =  117 bits (293), Expect = 1e-24
 Identities = 62/77 (80%), Positives = 69/77 (89%), Gaps = 1/77 (1%)
 Frame = -1

Query: 238 KFSIRTST-DKVQRAPQVVEFYHSLMKRDSRKDSAGEGVCGASSVANVRSSMIDEIENRS 62
           KFS+R+S+   VQRAPQVVEFYHSLMKRDSRK+S+  GVC AS VANVRSSMI EIENRS
Sbjct: 511 KFSMRSSSAGVVQRAPQVVEFYHSLMKRDSRKESSNGGVCEASDVANVRSSMIGEIENRS 570

Query: 61  SYLLAIKADIETQGEFV 11
           S+LLAIKAD+ETQGEFV
Sbjct: 571 SHLLAIKADVETQGEFV 587


>ref|XP_002317077.1| predicted protein [Populus trichocarpa] gi|222860142|gb|EEE97689.1|
           predicted protein [Populus trichocarpa]
          Length = 794

 Score =  117 bits (293), Expect = 1e-24
 Identities = 61/77 (79%), Positives = 69/77 (89%), Gaps = 1/77 (1%)
 Frame = -1

Query: 238 KFSIRTST-DKVQRAPQVVEFYHSLMKRDSRKDSAGEGVCGASSVANVRSSMIDEIENRS 62
           KFS+R++T   VQRAPQVVEFYHSLMKRDSRK+S+  G+C AS VANVRS+MI EIENRS
Sbjct: 512 KFSVRSTTAGVVQRAPQVVEFYHSLMKRDSRKESSNGGICEASDVANVRSNMIGEIENRS 571

Query: 61  SYLLAIKADIETQGEFV 11
           S+LLAIKADIETQGEFV
Sbjct: 572 SHLLAIKADIETQGEFV 588


>ref|XP_002268607.1| PREDICTED: protein CHUP1, chloroplastic-like [Vitis vinifera]
          Length = 801

 Score =  115 bits (289), Expect = 3e-24
 Identities = 59/76 (77%), Positives = 65/76 (85%)
 Frame = -1

Query: 238 KFSIRTSTDKVQRAPQVVEFYHSLMKRDSRKDSAGEGVCGASSVANVRSSMIDEIENRSS 59
           KFS R++T  VQRAPQVVEFYHSLMKRDSRKDS+  G+     VANVRS+MI EIENRSS
Sbjct: 507 KFSARSTTGIVQRAPQVVEFYHSLMKRDSRKDSSNGGIYDTPDVANVRSNMIGEIENRSS 566

Query: 58  YLLAIKADIETQGEFV 11
           YLLAIKAD+ETQGEFV
Sbjct: 567 YLLAIKADVETQGEFV 582


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