BLASTX nr result

ID: Coptis23_contig00038133 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038133
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524414.1| nucleotide binding protein, putative [Ricinu...   100   1e-19
ref|XP_002317805.1| predicted protein [Populus trichocarpa] gi|2...    99   5e-19
ref|XP_003634172.1| PREDICTED: uncharacterized protein LOC100853...    98   6e-19
emb|CBI23078.3| unnamed protein product [Vitis vinifera]               98   6e-19
ref|NP_190509.2| transducin/WD40 domain-containing protein [Arab...    96   4e-18

>ref|XP_002524414.1| nucleotide binding protein, putative [Ricinus communis]
           gi|223536298|gb|EEF37949.1| nucleotide binding protein,
           putative [Ricinus communis]
          Length = 847

 Score =  100 bits (249), Expect = 1e-19
 Identities = 46/76 (60%), Positives = 54/76 (71%)
 Frame = -3

Query: 275 LLAVGRGSGLLEVWICDISSCEFQISGSYDAHVQVITGLTWAFNGRSLYSCSQDDSLHSW 96
           LLAVG+GSG  +VW CDIS CEF   GS DAH  V+TGL WAF G  LYSC QD+ +H W
Sbjct: 440 LLAVGKGSGSFDVWTCDISGCEFSKCGSNDAHDYVVTGLAWAFEG-CLYSCGQDNYVHCW 498

Query: 95  ILHGGSLYEAPIPSNS 48
           +L G +L E P PSN+
Sbjct: 499 LLRGNALCEVPFPSNT 514


>ref|XP_002317805.1| predicted protein [Populus trichocarpa] gi|222858478|gb|EEE96025.1|
           predicted protein [Populus trichocarpa]
          Length = 894

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 48/86 (55%), Positives = 61/86 (70%)
 Frame = -3

Query: 275 LLAVGRGSGLLEVWICDISSCEFQISGSYDAHVQVITGLTWAFNGRSLYSCSQDDSLHSW 96
           LLAVG+GSG  EVW  DISS +F     YDAH  V+TGL WAF+G  LYSC Q++ + +W
Sbjct: 412 LLAVGKGSGSFEVWTADISSSKFDKVCLYDAHDCVVTGLAWAFDGCCLYSCGQENYVRAW 471

Query: 95  ILHGGSLYEAPIPSNSFVLQSSVNLP 18
           +LHG +L E  IPSN+  L+SS +LP
Sbjct: 472 VLHGSALCEVSIPSNTPGLRSSNDLP 497


>ref|XP_003634172.1| PREDICTED: uncharacterized protein LOC100853102 [Vitis vinifera]
          Length = 864

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 46/75 (61%), Positives = 55/75 (73%)
 Frame = -3

Query: 272 LAVGRGSGLLEVWICDISSCEFQISGSYDAHVQVITGLTWAFNGRSLYSCSQDDSLHSWI 93
           LAVG+G G  EVWICD+S  +F   GSY+AH  V+TGL WAF+G  LYSCSQD+S+ SW 
Sbjct: 379 LAVGKGCGSFEVWICDLSIRKFDRIGSYNAHDHVVTGLAWAFDGCCLYSCSQDNSVRSWS 438

Query: 92  LHGGSLYEAPIPSNS 48
           L G SL E PIP N+
Sbjct: 439 LCGNSLDEVPIPPNT 453


>emb|CBI23078.3| unnamed protein product [Vitis vinifera]
          Length = 800

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 46/75 (61%), Positives = 55/75 (73%)
 Frame = -3

Query: 272 LAVGRGSGLLEVWICDISSCEFQISGSYDAHVQVITGLTWAFNGRSLYSCSQDDSLHSWI 93
           LAVG+G G  EVWICD+S  +F   GSY+AH  V+TGL WAF+G  LYSCSQD+S+ SW 
Sbjct: 315 LAVGKGCGSFEVWICDLSIRKFDRIGSYNAHDHVVTGLAWAFDGCCLYSCSQDNSVRSWS 374

Query: 92  LHGGSLYEAPIPSNS 48
           L G SL E PIP N+
Sbjct: 375 LCGNSLDEVPIPPNT 389


>ref|NP_190509.2| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
           gi|332645016|gb|AEE78537.1| transducin/WD40
           domain-containing protein [Arabidopsis thaliana]
          Length = 892

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 44/85 (51%), Positives = 63/85 (74%)
 Frame = -3

Query: 272 LAVGRGSGLLEVWICDISSCEFQISGSYDAHVQVITGLTWAFNGRSLYSCSQDDSLHSWI 93
           LA+G+GSG  EVW C+IS+ +F+   S +AH QV+TGL W+++GR LYSCSQD+ + SWI
Sbjct: 405 LAIGKGSGSFEVWKCEISTRKFEQIVSTNAHNQVVTGLAWSYDGRCLYSCSQDNYVRSWI 464

Query: 92  LHGGSLYEAPIPSNSFVLQSSVNLP 18
           L   ++ E PIP+N+  L S+ +LP
Sbjct: 465 LCENAISEVPIPANTPGLSSTTDLP 489


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