BLASTX nr result
ID: Coptis23_contig00038133
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00038133 (277 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002524414.1| nucleotide binding protein, putative [Ricinu... 100 1e-19 ref|XP_002317805.1| predicted protein [Populus trichocarpa] gi|2... 99 5e-19 ref|XP_003634172.1| PREDICTED: uncharacterized protein LOC100853... 98 6e-19 emb|CBI23078.3| unnamed protein product [Vitis vinifera] 98 6e-19 ref|NP_190509.2| transducin/WD40 domain-containing protein [Arab... 96 4e-18 >ref|XP_002524414.1| nucleotide binding protein, putative [Ricinus communis] gi|223536298|gb|EEF37949.1| nucleotide binding protein, putative [Ricinus communis] Length = 847 Score = 100 bits (249), Expect = 1e-19 Identities = 46/76 (60%), Positives = 54/76 (71%) Frame = -3 Query: 275 LLAVGRGSGLLEVWICDISSCEFQISGSYDAHVQVITGLTWAFNGRSLYSCSQDDSLHSW 96 LLAVG+GSG +VW CDIS CEF GS DAH V+TGL WAF G LYSC QD+ +H W Sbjct: 440 LLAVGKGSGSFDVWTCDISGCEFSKCGSNDAHDYVVTGLAWAFEG-CLYSCGQDNYVHCW 498 Query: 95 ILHGGSLYEAPIPSNS 48 +L G +L E P PSN+ Sbjct: 499 LLRGNALCEVPFPSNT 514 >ref|XP_002317805.1| predicted protein [Populus trichocarpa] gi|222858478|gb|EEE96025.1| predicted protein [Populus trichocarpa] Length = 894 Score = 98.6 bits (244), Expect = 5e-19 Identities = 48/86 (55%), Positives = 61/86 (70%) Frame = -3 Query: 275 LLAVGRGSGLLEVWICDISSCEFQISGSYDAHVQVITGLTWAFNGRSLYSCSQDDSLHSW 96 LLAVG+GSG EVW DISS +F YDAH V+TGL WAF+G LYSC Q++ + +W Sbjct: 412 LLAVGKGSGSFEVWTADISSSKFDKVCLYDAHDCVVTGLAWAFDGCCLYSCGQENYVRAW 471 Query: 95 ILHGGSLYEAPIPSNSFVLQSSVNLP 18 +LHG +L E IPSN+ L+SS +LP Sbjct: 472 VLHGSALCEVSIPSNTPGLRSSNDLP 497 >ref|XP_003634172.1| PREDICTED: uncharacterized protein LOC100853102 [Vitis vinifera] Length = 864 Score = 98.2 bits (243), Expect = 6e-19 Identities = 46/75 (61%), Positives = 55/75 (73%) Frame = -3 Query: 272 LAVGRGSGLLEVWICDISSCEFQISGSYDAHVQVITGLTWAFNGRSLYSCSQDDSLHSWI 93 LAVG+G G EVWICD+S +F GSY+AH V+TGL WAF+G LYSCSQD+S+ SW Sbjct: 379 LAVGKGCGSFEVWICDLSIRKFDRIGSYNAHDHVVTGLAWAFDGCCLYSCSQDNSVRSWS 438 Query: 92 LHGGSLYEAPIPSNS 48 L G SL E PIP N+ Sbjct: 439 LCGNSLDEVPIPPNT 453 >emb|CBI23078.3| unnamed protein product [Vitis vinifera] Length = 800 Score = 98.2 bits (243), Expect = 6e-19 Identities = 46/75 (61%), Positives = 55/75 (73%) Frame = -3 Query: 272 LAVGRGSGLLEVWICDISSCEFQISGSYDAHVQVITGLTWAFNGRSLYSCSQDDSLHSWI 93 LAVG+G G EVWICD+S +F GSY+AH V+TGL WAF+G LYSCSQD+S+ SW Sbjct: 315 LAVGKGCGSFEVWICDLSIRKFDRIGSYNAHDHVVTGLAWAFDGCCLYSCSQDNSVRSWS 374 Query: 92 LHGGSLYEAPIPSNS 48 L G SL E PIP N+ Sbjct: 375 LCGNSLDEVPIPPNT 389 >ref|NP_190509.2| transducin/WD40 domain-containing protein [Arabidopsis thaliana] gi|332645016|gb|AEE78537.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] Length = 892 Score = 95.5 bits (236), Expect = 4e-18 Identities = 44/85 (51%), Positives = 63/85 (74%) Frame = -3 Query: 272 LAVGRGSGLLEVWICDISSCEFQISGSYDAHVQVITGLTWAFNGRSLYSCSQDDSLHSWI 93 LA+G+GSG EVW C+IS+ +F+ S +AH QV+TGL W+++GR LYSCSQD+ + SWI Sbjct: 405 LAIGKGSGSFEVWKCEISTRKFEQIVSTNAHNQVVTGLAWSYDGRCLYSCSQDNYVRSWI 464 Query: 92 LHGGSLYEAPIPSNSFVLQSSVNLP 18 L ++ E PIP+N+ L S+ +LP Sbjct: 465 LCENAISEVPIPANTPGLSSTTDLP 489