BLASTX nr result

ID: Coptis23_contig00038123 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038123
         (699 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50953.1| T1.1 [Malus x robusta]                                217   2e-54
ref|XP_002304873.1| predicted protein [Populus trichocarpa] gi|2...   211   1e-52
ref|XP_002299130.1| predicted protein [Populus trichocarpa] gi|2...   211   1e-52
emb|CCH50955.1| T1.3 [Malus x robusta]                                206   4e-51
ref|XP_002530868.1| conserved hypothetical protein [Ricinus comm...   206   5e-51

>emb|CCH50953.1| T1.1 [Malus x robusta]
          Length = 316

 Score =  217 bits (553), Expect = 2e-54
 Identities = 112/176 (63%), Positives = 140/176 (79%), Gaps = 5/176 (2%)
 Frame = +1

Query: 55  SADHMGVEGQYHLLLQIVVIVSFLTTVVGICFHRSFTVSFVRSLSIFFQGVWFIVMGFML 234
           SADHMG EGQYH+LLQ+VV+VSF T ++GI F +SF VSFVRSLSIFFQGVW +VMGFML
Sbjct: 141 SADHMGPEGQYHMLLQLVVLVSFTTALMGIGFPKSFLVSFVRSLSIFFQGVWLMVMGFML 200

Query: 235 WTPELIPNGCFLNYEEGHNIVRCETEHALHRAKSLVNIEFSWILTLVAIFGILFYLIMIK 414
           WTP+L+P GCF+N EEGH +VRC  + A HRAKSLVN++FSW L  +AIFG+ FYL+++K
Sbjct: 201 WTPDLMPKGCFMNLEEGHQVVRCHGDEARHRAKSLVNLQFSWFLVGIAIFGVSFYLVLVK 260

Query: 415 VNVEKVEYWSLGN-AEYREENSD-DIESQNKSH-GESRSFI-HIGKDS-PSIDMER 567
           V  EKVEY+SL    E  EE++D D+ESQ  S  G+S+SF+ H+GK +   IDMER
Sbjct: 261 VYGEKVEYFSLTRLREEDEEDTDLDVESQKISKLGDSKSFVNHMGKTAFAPIDMER 316


>ref|XP_002304873.1| predicted protein [Populus trichocarpa] gi|222842305|gb|EEE79852.1|
           predicted protein [Populus trichocarpa]
          Length = 313

 Score =  211 bits (537), Expect = 1e-52
 Identities = 107/173 (61%), Positives = 129/173 (74%), Gaps = 2/173 (1%)
 Frame = +1

Query: 55  SADHMGVEGQYHLLLQIVVIVSFLTTVVGICFHRSFTVSFVRSLSIFFQGVWFIVMGFML 234
           SADHMGVEGQYHLLLQIV++VS  T ++GI   +SF VSFVRS SI FQGVWFIVMG+ L
Sbjct: 141 SADHMGVEGQYHLLLQIVIVVSLATALMGIGLPKSFMVSFVRSASITFQGVWFIVMGYAL 200

Query: 235 WTPELIPNGCFLNYEEGHNIVRCETEHALHRAKSLVNIEFSWILTLVAIFGILFYLIMIK 414
           WTP LIP GCFLN EEGH +VRC  E ALHRAKSLVNI+FSW+L  + IF + FYL ++K
Sbjct: 201 WTPSLIPKGCFLNLEEGHQVVRCHGEEALHRAKSLVNIQFSWLLIAIIIFVMSFYLFLVK 260

Query: 415 VNVEKVEYWSLGNAE-YREENSDDIESQNKSH-GESRSFIHIGKDSPSIDMER 567
           +  ++ EY +L       EE+SDD+ESQ  S  GE +SF+ IG+    IDMER
Sbjct: 261 LYGDEAEYSTLTKENLLYEEDSDDVESQKGSKVGEKKSFMEIGRGFVPIDMER 313


>ref|XP_002299130.1| predicted protein [Populus trichocarpa] gi|222846388|gb|EEE83935.1|
           predicted protein [Populus trichocarpa]
          Length = 314

 Score =  211 bits (536), Expect = 1e-52
 Identities = 106/174 (60%), Positives = 131/174 (75%), Gaps = 3/174 (1%)
 Frame = +1

Query: 55  SADHMGVEGQYHLLLQIVVIVSFLTTVVGICFHRSFTVSFVRSLSIFFQGVWFIVMGFML 234
           SADHMGVEGQYHLLLQIV++VS  TT++GI   +SF VSFVRS SI FQGVWFIVMG+ L
Sbjct: 141 SADHMGVEGQYHLLLQIVIVVSLATTLMGIGLPKSFMVSFVRSASIMFQGVWFIVMGYAL 200

Query: 235 WTPELIPNGCFLNYEEGHNIVRCETEHALHRAKSLVNIEFSWILTLVAIFGILFYLIMIK 414
           WTP LIP GCFLN EEGH +VRC    ALHRAKSLVNI+FSW+L  + IF +LFYL+++K
Sbjct: 201 WTPSLIPKGCFLNLEEGHLVVRCHDNEALHRAKSLVNIQFSWLLIAITIFVMLFYLVLVK 260

Query: 415 VNVEKVEYWSLGNAEYR--EENSDDIESQ-NKSHGESRSFIHIGKDSPSIDMER 567
              +KVEY +L   E +  +++ DD+ESQ +K  G+ +SF+   K    IDMER
Sbjct: 261 FYGDKVEYSTLTREEDQLPDDDLDDVESQKSKKVGDKKSFMDFEKGFAPIDMER 314


>emb|CCH50955.1| T1.3 [Malus x robusta]
          Length = 316

 Score =  206 bits (524), Expect = 4e-51
 Identities = 108/176 (61%), Positives = 132/176 (75%), Gaps = 5/176 (2%)
 Frame = +1

Query: 55  SADHMGVEGQYHLLLQIVVIVSFLTTVVGICFHRSFTVSFVRSLSIFFQGVWFIVMGFML 234
           S DHMG EGQYH+LLQ+VV+VS  TT++GI F +SF VSFVRSLSIF QG W IVMGFML
Sbjct: 141 STDHMGPEGQYHMLLQLVVLVSLATTLMGIGFPKSFLVSFVRSLSIFSQGAWLIVMGFML 200

Query: 235 WTPELIPNGCFLNYEEGHNIVRCETEHALHRAKSLVNIEFSWILTLVAIFGILFYLIMIK 414
           WTPEL+P GCF+N EE   +V C  + ALHRAKSLVN+EFSW L  +AIFG+ FYL++++
Sbjct: 201 WTPELMPKGCFMNLEEDPKVVTCHGDEALHRAKSLVNLEFSWFLVGIAIFGVSFYLVLVR 260

Query: 415 VNVEKVEYWSLG--NAEYREENSDDIESQNKSH-GESRSFI-HIGKDS-PSIDMER 567
           V  EKVEY SL     E  EE + D+ESQ KS  GE+ SF+ H GK +  S+DME+
Sbjct: 261 VYSEKVEYSSLTRLREEDEEEPNLDVESQKKSKLGETESFVSHTGKTAFASMDMEK 316


>ref|XP_002530868.1| conserved hypothetical protein [Ricinus communis]
           gi|223529557|gb|EEF31508.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 258

 Score =  206 bits (523), Expect = 5e-51
 Identities = 104/182 (57%), Positives = 128/182 (70%), Gaps = 11/182 (6%)
 Frame = +1

Query: 55  SADHMGVEGQYHLLLQIVVIVSFLTTVVGICFHRSFTVSFVRSLSIFFQGVWFIVMGFML 234
           SADHMGVEGQYHLLLQIV++VS  TT++GI + RSF VSFVRS SI FQG+W I MG++L
Sbjct: 77  SADHMGVEGQYHLLLQIVIVVSLATTLLGIPYPRSFLVSFVRSASIMFQGIWLITMGYVL 136

Query: 235 WTPELIPNGCFLNYEEGHNIVRCETEHALHRAKSLVNIEFSWILTLVAIFGILFYLIMIK 414
           WTP L+P GCF++ EEGH +VRC  E +LHRAKSLVNI+FSW L  + I  + FYL+++K
Sbjct: 137 WTPSLVPKGCFMHLEEGHKVVRCSGEESLHRAKSLVNIQFSWFLIGITILVMCFYLVLLK 196

Query: 415 VNVEKVEYWSLGNAEYR------EENSDDIESQNK-----SHGESRSFIHIGKDSPSIDM 561
              EKVEY SL  AE +       E+  D+ESQ K         S SF+HIG+    IDM
Sbjct: 197 YYGEKVEYTSLTKAEDQLLEEDSSESDRDVESQKKVTTKFGANNSSSFMHIGRSFAPIDM 256

Query: 562 ER 567
           ER
Sbjct: 257 ER 258


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