BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038112
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR17838.1| unknown [Picea sitchensis]                              81   8e-14
ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containi...    76   2e-12
ref|XP_002277701.1| PREDICTED: pentatricopeptide repeat-containi...    76   2e-12
emb|CAN71727.1| hypothetical protein VITISV_003014 [Vitis vinifera]    76   2e-12
ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containi...    76   3e-12

>gb|ABR17838.1| unknown [Picea sitchensis]
          Length = 795

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 42/104 (40%), Positives = 60/104 (57%)
 Frame = +1

Query: 1   VDAYGKCLDINAATFLFTSSRKPTAAIWNAMISGYNLNRTAHRGLDLFVEMLRFQVFPDS 180
           V+ Y KC ++N A  LF        A WNA+I GY+LN   H  L  F  M    + P+S
Sbjct: 263 VNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNS 322

Query: 181 ITMLMLFQSCGELGSVKQGTIIHGYCCSKGFDSHLTVGNAMMDM 312
           ITM+ +  +C  L +++QG  IHGY    GF+S+  VGNA+++M
Sbjct: 323 ITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNM 366



 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 38/104 (36%), Positives = 60/104 (57%)
 Frame = +1

Query: 1   VDAYGKCLDINAATFLFTSSRKPTAAIWNAMISGYNLNRTAHRGLDLFVEMLRFQVFPDS 180
           V+ Y KC ++N+A  LF    K     WNA+ISGY+ +   H  L LF+EM    + PDS
Sbjct: 364 VNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDS 423

Query: 181 ITMLMLFQSCGELGSVKQGTIIHGYCCSKGFDSHLTVGNAMMDM 312
             ++ +  +C    +++QG  IHGY    GF+S++ VG  ++D+
Sbjct: 424 FAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDI 467



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 33/101 (32%), Positives = 52/101 (51%)
 Frame = +1

Query: 10  YGKCLDINAATFLFTSSRKPTAAIWNAMISGYNLNRTAHRGLDLFVEMLRFQVFPDSITM 189
           Y KC  +  A  +F    K     WNA+I+GY+ N   +  L LF EM    + P+S T+
Sbjct: 165 YTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTL 224

Query: 190 LMLFQSCGELGSVKQGTIIHGYCCSKGFDSHLTVGNAMMDM 312
           + +   C  L +++QG  IH Y    G +S + V N +++M
Sbjct: 225 VSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNM 265


>ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Cucumis sativus]
           gi|449478665|ref|XP_004155385.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g02980-like [Cucumis sativus]
          Length = 604

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 37/104 (35%), Positives = 58/104 (55%)
 Frame = +1

Query: 1   VDAYGKCLDINAATFLFTSSRKPTAAIWNAMISGYNLNRTAHRGLDLFVEMLRFQVFPDS 180
           ++ Y +C D+NAA  +F    +P    +NA+I+GY  +   +  L LF E+    + P  
Sbjct: 172 INMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTD 231

Query: 181 ITMLMLFQSCGELGSVKQGTIIHGYCCSKGFDSHLTVGNAMMDM 312
           +TML +  SC  LG++  G  IH Y   KGFD ++ V  A++DM
Sbjct: 232 VTMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDM 275


>ref|XP_002277701.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
            mitochondrial [Vitis vinifera]
          Length = 1008

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 36/104 (34%), Positives = 56/104 (53%)
 Frame = +1

Query: 1    VDAYGKCLDINAATFLFTSSRKPTAAIWNAMISGYNLNRTAHRGLDLFVEMLRFQVFPDS 180
            +  Y +  +IN+  FLF    K   A+WNA++S Y   + A   +  F E+L  +V PD 
Sbjct: 699  ISMYARFENINSFIFLFEMGGKEDIALWNAIMSVYVQTKNAKESVTFFCELLHARVEPDY 758

Query: 181  ITMLMLFQSCGELGSVKQGTIIHGYCCSKGFDSHLTVGNAMMDM 312
            IT L L  +C +L S+     +  Y   KGFD H+ + NA++D+
Sbjct: 759  ITFLSLISACVQLSSLNLSNSVMAYVIQKGFDKHIVISNALIDL 802



 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 34/100 (34%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
 Frame = +1

Query: 10  YGKCLDINAATFLFTSSRKPTAAIWNAMISGYNLNRTAHRGLDLFVEMLRFQVF-PDSIT 186
           Y K  D+N+A F+F    +     WN+MISGY  N      +D F +M +F+ F PD+I+
Sbjct: 402 YAKLGDLNSADFIFYQMPRRNLLSWNSMISGYGHNGLWEASMDAFCDM-QFEGFDPDAIS 460

Query: 187 MLMLFQSCGELGSVKQGTIIHGYCCSKGFDSHLTVGNAMM 306
           ++ +  +C +L ++  G   H +   K FDS+L + NA++
Sbjct: 461 IVNILSACSKLEAILLGKAAHAFSFRKEFDSNLNISNALL 500


>emb|CAN71727.1| hypothetical protein VITISV_003014 [Vitis vinifera]
          Length = 1167

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 36/104 (34%), Positives = 56/104 (53%)
 Frame = +1

Query: 1    VDAYGKCLDINAATFLFTSSRKPTAAIWNAMISGYNLNRTAHRGLDLFVEMLRFQVFPDS 180
            +  Y +  +IN+  FLF    K   A+WNA++S Y   + A   +  F E+L  +V PD 
Sbjct: 858  ISMYARFENINSFIFLFEMGGKEDIALWNAIMSVYVQTKNAKESVTFFCELLHARVEPDY 917

Query: 181  ITMLMLFQSCGELGSVKQGTIIHGYCCSKGFDSHLTVGNAMMDM 312
            IT L L  +C +L S+     +  Y   KGFD H+ + NA++D+
Sbjct: 918  ITFLSLISACVQLSSLNLSNSVMAYVIQKGFDKHIVISNALIDL 961


>ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Cucumis sativus]
          Length = 619

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 35/104 (33%), Positives = 56/104 (53%)
 Frame = +1

Query: 1   VDAYGKCLDINAATFLFTSSRKPTAAIWNAMISGYNLNRTAHRGLDLFVEMLRFQVFPDS 180
           +  YGKC D+ +A  +F S +K     WNAMI+GY  N  +   + LF +M      PD 
Sbjct: 270 IHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQ 329

Query: 181 ITMLMLFQSCGELGSVKQGTIIHGYCCSKGFDSHLTVGNAMMDM 312
           IT++ +  +C  +G++  G  +  Y   +GF   + VG A++DM
Sbjct: 330 ITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDM 373



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/104 (27%), Positives = 53/104 (50%)
 Frame = +1

Query: 1   VDAYGKCLDINAATFLFTSSRKPTAAIWNAMISGYNLNRTAHRGLDLFVEMLRFQVFPDS 180
           +  Y +C  +  A  +F    +     WN+MISGY+  R A   + LF EM+     P+ 
Sbjct: 169 ITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNE 228

Query: 181 ITMLMLFQSCGELGSVKQGTIIHGYCCSKGFDSHLTVGNAMMDM 312
           ++++ +  +CGELG +K GT +  +        +  +G+A++ M
Sbjct: 229 MSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHM 272