BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038103
         (497 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535324.1| PREDICTED: pentatricopeptide repeat-containi...    92   3e-17
emb|CBI39579.3| unnamed protein product [Vitis vinifera]               86   2e-15
ref|XP_002278152.1| PREDICTED: pentatricopeptide repeat-containi...    86   2e-15
ref|XP_004144815.1| PREDICTED: pentatricopeptide repeat-containi...    84   1e-14
ref|XP_002330193.1| predicted protein [Populus trichocarpa] gi|2...    81   1e-13

>ref|XP_003535324.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09190-like [Glycine max]
          Length = 483

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 41/59 (69%), Positives = 50/59 (84%)
 Frame = -2

Query: 496 GHLELAEHAVKKLIHLEPWNSGNYVLLSNIYAEQGKWDQVEKARVTMRGKCILKVPGQS 320
           G  E+AE+A K+L+ LEPWNSGNYVLLSN+YAE+G+WD+VEK RV MRG  + KVPGQS
Sbjct: 422 GDREIAENAAKELVRLEPWNSGNYVLLSNVYAEEGRWDEVEKVRVLMRGGGVKKVPGQS 480


>emb|CBI39579.3| unnamed protein product [Vitis vinifera]
          Length = 459

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 41/61 (67%), Positives = 48/61 (78%)
 Frame = -2

Query: 496 GHLELAEHAVKKLIHLEPWNSGNYVLLSNIYAEQGKWDQVEKARVTMRGKCILKVPGQST 317
           G ++ AE AVK+LI LEPWNSGNYVLLSN+YAE GKWD+VEK R  M+ K I K PGQS 
Sbjct: 397 GDVKHAECAVKELIELEPWNSGNYVLLSNVYAEDGKWDEVEKVRALMKEKNIRKNPGQSM 456

Query: 316 I 314
           +
Sbjct: 457 V 457


>ref|XP_002278152.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09190
           [Vitis vinifera]
          Length = 485

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 41/61 (67%), Positives = 48/61 (78%)
 Frame = -2

Query: 496 GHLELAEHAVKKLIHLEPWNSGNYVLLSNIYAEQGKWDQVEKARVTMRGKCILKVPGQST 317
           G ++ AE AVK+LI LEPWNSGNYVLLSN+YAE GKWD+VEK R  M+ K I K PGQS 
Sbjct: 423 GDVKHAECAVKELIELEPWNSGNYVLLSNVYAEDGKWDEVEKVRALMKEKNIRKNPGQSM 482

Query: 316 I 314
           +
Sbjct: 483 V 483


>ref|XP_004144815.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09190-like [Cucumis sativus]
           gi|449490933|ref|XP_004158752.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g09190-like [Cucumis sativus]
          Length = 484

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 39/59 (66%), Positives = 48/59 (81%)
 Frame = -2

Query: 496 GHLELAEHAVKKLIHLEPWNSGNYVLLSNIYAEQGKWDQVEKARVTMRGKCILKVPGQS 320
           G+L+LAE AVK+LI LEPWNSGNYVLLSN+ AE+G+W++VE  R  MR K + K PGQS
Sbjct: 423 GNLKLAEMAVKELISLEPWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAPGQS 481


>ref|XP_002330193.1| predicted protein [Populus trichocarpa] gi|222871649|gb|EEF08780.1|
           predicted protein [Populus trichocarpa]
          Length = 485

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 39/61 (63%), Positives = 46/61 (75%)
 Frame = -2

Query: 496 GHLELAEHAVKKLIHLEPWNSGNYVLLSNIYAEQGKWDQVEKARVTMRGKCILKVPGQST 317
           G +ELA  AVK+LI LEPWNSGNYVLLSN+YAE+ +WD+V   R  MR K + K PGQS 
Sbjct: 424 GDVELAHLAVKELIDLEPWNSGNYVLLSNMYAEEERWDKVANVRGMMREKNVKKTPGQSV 483

Query: 316 I 314
           I
Sbjct: 484 I 484