BLASTX nr result

ID: Coptis23_contig00038084 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038084
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525387.1| conserved hypothetical protein [Ricinus comm...   118   4e-25
emb|CBI32148.3| unnamed protein product [Vitis vinifera]              109   3e-22
ref|XP_002264073.1| PREDICTED: uncharacterized protein LOC100260...   109   3e-22
ref|XP_002311787.1| predicted protein [Populus trichocarpa] gi|2...   105   5e-21
emb|CAN70052.1| hypothetical protein VITISV_038640 [Vitis vinifera]    97   1e-18

>ref|XP_002525387.1| conserved hypothetical protein [Ricinus communis]
           gi|223535350|gb|EEF37025.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 603

 Score =  118 bits (296), Expect = 4e-25
 Identities = 64/102 (62%), Positives = 84/102 (82%), Gaps = 3/102 (2%)
 Frame = -1

Query: 303 RMFSDLSKSAKPDAPTACFDQFLEFHNQIVQAVSDMESIQAATASNEIPQTPLRKRQEGL 124
           +MFS+LSKSA+PDAP ACFDQFLEFHNQIVQAV+D+ SI+AAT++ EI Q P +  Q+  
Sbjct: 354 KMFSNLSKSARPDAPAACFDQFLEFHNQIVQAVTDIVSIEAATSAAEIAQNP-KVEQKDN 412

Query: 123 KRHPEDDAYILHE--HNSMD-QNCDSELSSSKRRSALYKSVS 7
           ++ PE++  ILHE   NS+D Q+ +SELSSSKRR+ALYKS++
Sbjct: 413 RKQPEEEFPILHEIIQNSVDSQSRNSELSSSKRRTALYKSIA 454


>emb|CBI32148.3| unnamed protein product [Vitis vinifera]
          Length = 547

 Score =  109 bits (272), Expect = 3e-22
 Identities = 63/102 (61%), Positives = 77/102 (75%), Gaps = 2/102 (1%)
 Frame = -1

Query: 303 RMFSDLSKSAKPDAPTACFDQFLEFHNQIVQAVSDMESIQAATASNEIPQTPLRKRQEGL 124
           +M S+LSKSAK DAP ACFDQFL+FH QIVQAV+DM SIQAAT   E+ QTP  + +   
Sbjct: 309 KMLSNLSKSAKADAPAACFDQFLDFHLQIVQAVTDMVSIQAAT---EMAQTPNAEGKGAF 365

Query: 123 KRHPEDDAYILHE--HNSMDQNCDSELSSSKRRSALYKSVSV 4
            +  E+D+ ILHE  HNSMDQN +S L+ SKRRS LYKS++V
Sbjct: 366 GKQHEEDSPILHEIMHNSMDQNRNS-LNLSKRRSVLYKSIAV 406


>ref|XP_002264073.1| PREDICTED: uncharacterized protein LOC100260333 [Vitis vinifera]
          Length = 592

 Score =  109 bits (272), Expect = 3e-22
 Identities = 63/102 (61%), Positives = 77/102 (75%), Gaps = 2/102 (1%)
 Frame = -1

Query: 303 RMFSDLSKSAKPDAPTACFDQFLEFHNQIVQAVSDMESIQAATASNEIPQTPLRKRQEGL 124
           +M S+LSKSAK DAP ACFDQFL+FH QIVQAV+DM SIQAAT   E+ QTP  + +   
Sbjct: 354 KMLSNLSKSAKADAPAACFDQFLDFHLQIVQAVTDMVSIQAAT---EMAQTPNAEGKGAF 410

Query: 123 KRHPEDDAYILHE--HNSMDQNCDSELSSSKRRSALYKSVSV 4
            +  E+D+ ILHE  HNSMDQN +S L+ SKRRS LYKS++V
Sbjct: 411 GKQHEEDSPILHEIMHNSMDQNRNS-LNLSKRRSVLYKSIAV 451


>ref|XP_002311787.1| predicted protein [Populus trichocarpa] gi|222851607|gb|EEE89154.1|
           predicted protein [Populus trichocarpa]
          Length = 593

 Score =  105 bits (261), Expect = 5e-21
 Identities = 60/101 (59%), Positives = 77/101 (76%), Gaps = 2/101 (1%)
 Frame = -1

Query: 303 RMFSDLSKSAKPDAPTACFDQFLEFHNQIVQAVSDMESIQAATASNEIPQTPLRKRQEGL 124
           +MFS+LSKSA+P+AP ACF+QFLEFH  IV+AV+DM SIQAAT++ EI Q    K+ E  
Sbjct: 357 KMFSNLSKSARPEAPAACFEQFLEFHLHIVRAVTDMVSIQAATSAAEIAQDTNIKQCE-- 414

Query: 123 KRHPEDDAYILHE--HNSMDQNCDSELSSSKRRSALYKSVS 7
                 D+ ILHE  +NSMDQ  +SEL+SSKRR+ALYKS++
Sbjct: 415 ------DSSILHEIGNNSMDQCGNSELNSSKRRTALYKSIA 449


>emb|CAN70052.1| hypothetical protein VITISV_038640 [Vitis vinifera]
          Length = 272

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 54/94 (57%), Positives = 68/94 (72%), Gaps = 2/94 (2%)
 Frame = -1

Query: 279 SAKPDAPTACFDQFLEFHNQIVQAVSDMESIQAATASNEIPQTPLRKRQEGLKRHPEDDA 100
           S  P  P ACFDQFL+FH QIVQAV+DM SIQAAT   E+ Q+P  + +    ++ E+D+
Sbjct: 141 STPPAPPAACFDQFLDFHLQIVQAVTDMVSIQAAT---EMVQSPNAEGKGAFGKYHEEDS 197

Query: 99  YILHE--HNSMDQNCDSELSSSKRRSALYKSVSV 4
            ILHE  HNSMDQN +S+L+ SKRRS LYKS +V
Sbjct: 198 SILHEIIHNSMDQNRNSDLNLSKRRSVLYKSTAV 231


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