BLASTX nr result

ID: Coptis23_contig00038074 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038074
         (559 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK44646.1| unknown [Medicago truncatula]                           60   3e-07
ref|XP_003542610.1| PREDICTED: F-box/kelch-repeat protein At1g57...    60   3e-07
gb|ACJ85554.1| unknown [Medicago truncatula]                           60   3e-07
ref|XP_003554440.1| PREDICTED: F-box/kelch-repeat protein At1g57...    58   1e-06
ref|NP_001241212.1| uncharacterized protein LOC100809651 [Glycin...    58   1e-06

>gb|AFK44646.1| unknown [Medicago truncatula]
          Length = 376

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 3/111 (2%)
 Frame = -2

Query: 342 EPKDEVNDKIGLK---DLPSELFDMILSSFLLDDWIRFRLTCKLWMSMTPPIQSNHLLMH 172
           E  +  ND + L+   DLP+EL +MI+S   L+D +R    CK W          + + +
Sbjct: 22  EATEVKNDNLELQTWADLPAELLEMIISRLALEDNVRASAVCKSW----------NFVAN 71

Query: 171 SKPESNQLPWLMSFPKDNKGVCTFHHPVYGDTYTGDFPELFGAVIRSAKFG 19
           +    NQ PWLM FPK  +    F+ PV   TY+ +FPEL G+ +   K G
Sbjct: 72  AVRMVNQSPWLMYFPKFGQWY-EFYDPVQRKTYSIEFPELNGSRVCYTKDG 121


>ref|XP_003542610.1| PREDICTED: F-box/kelch-repeat protein At1g57790-like [Glycine max]
          Length = 376

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 37/95 (38%), Positives = 49/95 (51%)
 Frame = -2

Query: 303 DLPSELFDMILSSFLLDDWIRFRLTCKLWMSMTPPIQSNHLLMHSKPESNQLPWLMSFPK 124
           DLP+EL ++ILS   LDD +R  + CK W          H +  S    NQ PWLM FPK
Sbjct: 38  DLPTELLELILSRLSLDDNVRASVVCKRW----------HSVATSVCVVNQSPWLMYFPK 87

Query: 123 DNKGVCTFHHPVYGDTYTGDFPELFGAVIRSAKFG 19
                  F+ PV+  TY+ + PEL G+ +   K G
Sbjct: 88  FGDWY-EFYDPVHRKTYSIELPELSGSRVCYTKDG 121


>gb|ACJ85554.1| unknown [Medicago truncatula]
          Length = 220

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 3/111 (2%)
 Frame = -2

Query: 342 EPKDEVNDKIGLK---DLPSELFDMILSSFLLDDWIRFRLTCKLWMSMTPPIQSNHLLMH 172
           E  +  ND + L+   DLP+EL +MI+S   L+D +R    CK W          + + +
Sbjct: 22  EATEVKNDNLELQTWADLPAELLEMIISRLALEDNVRASAVCKSW----------NFVAN 71

Query: 171 SKPESNQLPWLMSFPKDNKGVCTFHHPVYGDTYTGDFPELFGAVIRSAKFG 19
           +    NQ PWLM FPK  +    F+ PV   TY+ +FPEL G+ +   K G
Sbjct: 72  AVRMVNQSPWLMYFPKFGQWY-EFYDPVQRKTYSIEFPELNGSRVCYTKDG 121


>ref|XP_003554440.1| PREDICTED: F-box/kelch-repeat protein At1g57790-like [Glycine max]
          Length = 376

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 41/111 (36%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
 Frame = -2

Query: 348 VEEPKDEVNDKIGLKDLPSELFDMILSSFLLDDWIRFRLTCKLWMSMTPPIQSNHLLMHS 169
           V E K E  +     DLP+EL + ILS  +L D IR    C+ W S+   ++        
Sbjct: 23  VAEVKSENLEMQSWADLPAELLESILSRLILADNIRASAVCRRWHSVASDVR-------- 74

Query: 168 KPESNQLPWLMSFPKDNKGVC-TFHHPVYGDTYTGDFPELFGAVIRSAKFG 19
               NQ PWLM FPK   G C  F+ PV   T+T + PEL G+ +   K G
Sbjct: 75  --VVNQSPWLMYFPK--FGDCYEFYDPVQRKTHTFELPELNGSRVCYTKDG 121


>ref|NP_001241212.1| uncharacterized protein LOC100809651 [Glycine max]
           gi|255641457|gb|ACU21004.1| unknown [Glycine max]
          Length = 376

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 36/95 (37%), Positives = 48/95 (50%)
 Frame = -2

Query: 303 DLPSELFDMILSSFLLDDWIRFRLTCKLWMSMTPPIQSNHLLMHSKPESNQLPWLMSFPK 124
           DLP+EL ++ILS   LDD +R  + CK W          H +  S    NQ PWLM FPK
Sbjct: 38  DLPTELLELILSRLSLDDNVRASVVCKRW----------HSVATSVCVVNQSPWLMYFPK 87

Query: 123 DNKGVCTFHHPVYGDTYTGDFPELFGAVIRSAKFG 19
                  F+ P +  TY+ + PEL G+ +   K G
Sbjct: 88  FGDWY-EFYDPAHRKTYSIELPELRGSRVCYTKDG 121


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