BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038043
         (926 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA73042.1| polyprotein [Ananas comosus]                          349   6e-94
emb|CAN66189.1| hypothetical protein VITISV_006047 [Vitis vinifera]   343   3e-92
emb|CAN59997.1| hypothetical protein VITISV_020888 [Vitis vinifera]   343   4e-92
emb|CAH66749.1| H0409D10.7 [Oryza sativa Indica Group]                335   9e-90
gb|ABN08587.1| Polynucleotidyl transferase, Ribonuclease H fold ...   334   2e-89

>emb|CAA73042.1| polyprotein [Ananas comosus]
          Length = 871

 Score =  349 bits (895), Expect = 6e-94
 Identities = 170/310 (54%), Positives = 220/310 (70%), Gaps = 2/310 (0%)
 Frame = +3

Query: 3    TQKNEPFIWTDECEQAFEKLKIRLTTAPVLIVPSSEDSYVVYSDASGKGLGCVLMQNGRV 182
            T K   FIW D CE++F++LK RLTTAP+L +P +   YVVYSDAS  GLGCVLMQ+ +V
Sbjct: 275  THKGVKFIWNDACERSFQELKQRLTTAPILTLPVAGAGYVVYSDASLNGLGCVLMQDDKV 334

Query: 183  VAYGSRQLKNHEKNYPTHDLELAAIVFALKIWRHYLYGERFEVFSDHKSLKYLFSQKDLN 362
            +AY SRQLK +EKNYPTHDLELAA+VFALK+WRHYLYGER EV++DHKSLKYLF+QK+LN
Sbjct: 335  IAYASRQLKEYEKNYPTHDLELAAVVFALKLWRHYLYGERCEVYTDHKSLKYLFTQKELN 394

Query: 363  MRQTRWTEFLKDYDYILHYHPGKANVVADALSRRGGSVLADLKVWE--MLESITTYSFVN 536
            +RQ RW E LKDYD  + YHPGKANVVADALSR+    LA   V +  ++E +       
Sbjct: 395  LRQRRWLELLKDYDLTILYHPGKANVVADALSRKSMENLAMHVVTQPRLIEQMKRLELEI 454

Query: 537  PTADDTVYVAQMRIQPTLTQRIMDVQVTSPDFVEFSHKASSVDIPDWAFHSDGSLRFRNR 716
             T D  + +  + +QPTL  RI + Q +  +  +   K       D+    DG +RFR R
Sbjct: 455  VTPDTPMRLMTLVVQPTLLDRIKEKQASDVELQKIKGKMVDGCTGDFTLDGDGLMRFRGR 514

Query: 717  IWVPTDVHLRTDIMDEAHKTRYTIHPGGTKMHKDLRRHF*WPGMKREIAEYISRCLVCQQ 896
            I VP D  ++ DI+ EAH+  Y IHPGGTKM+KDL+  + WPG+K+++ E++++CL CQQ
Sbjct: 515  ICVPADSGIKEDILQEAHRAPYAIHPGGTKMYKDLKLLYWWPGIKKDVGEFVAKCLTCQQ 574

Query: 897  VKAEHQRPAG 926
            VKAEH+ PAG
Sbjct: 575  VKAEHRVPAG 584


>emb|CAN66189.1| hypothetical protein VITISV_006047 [Vitis vinifera]
          Length = 1573

 Score =  343 bits (881), Expect = 3e-92
 Identities = 170/311 (54%), Positives = 222/311 (71%), Gaps = 4/311 (1%)
 Frame = +3

Query: 3    TQKNEPFIWTDECEQAFEKLKIRLTTAPVLIVPSSEDSYVVYSDASGKGLGCVLMQNGRV 182
            T+K   F W +ECE AF++LK +LTTAPVL  P S + +++Y DAS  GLGCVLMQ G+V
Sbjct: 945  TRKWVKFDWNEECENAFQELKQKLTTAPVLTAPISGELFMIYCDASTVGLGCVLMQQGKV 1004

Query: 183  VAYGSRQLKNHEKNYPTHDLELAAIVFALKIWRHYLYGERFEVFSDHKSLKYLFSQKDLN 362
            VAY SRQLK HE+NY  HDLELAA+VFALK W HYLYGE+FEV+SDHKSLKY+F+QKDLN
Sbjct: 1005 VAYASRQLKQHERNYLAHDLELAAMVFALKTWIHYLYGEKFEVYSDHKSLKYIFTQKDLN 1064

Query: 363  MRQTRWTEFLKDYDYILHYHPGKANVVADALSRR--GGSVLADLKVWEMLESITTYSFVN 536
             RQ RW E L+DYD+ LHYHPGKANVVADALSR+  G      L+ +EM   I  +    
Sbjct: 1065 SRQRRWMETLEDYDFALHYHPGKANVVADALSRKSYGQLFSLGLREFEMYAVIEDFELCL 1124

Query: 537  PTADDTVYVAQMRIQPTLTQRIMDVQVTSP--DFVEFSHKASSVDIPDWAFHSDGSLRFR 710
                    +  +  +P + QRI++ QV     + V+    A  +D  +W+ + DGS+RF+
Sbjct: 1125 VQEGRGPCLYSISARPMVIQRIVEAQVHDEFLEKVKAQLVAGEID-ENWSMYEDGSVRFK 1183

Query: 711  NRIWVPTDVHLRTDIMDEAHKTRYTIHPGGTKMHKDLRRHF*WPGMKREIAEYISRCLVC 890
             R+ VP DV LR +++ +AH+ +YTIHPG TKM++DL+R F W GMKR+IA++++ C +C
Sbjct: 1184 GRLCVPKDVELRNELLADAHRAKYTIHPGNTKMYQDLKRQFXWSGMKRDIAQFVANCQIC 1243

Query: 891  QQVKAEHQRPA 923
            QQVKAEHQRPA
Sbjct: 1244 QQVKAEHQRPA 1254


>emb|CAN59997.1| hypothetical protein VITISV_020888 [Vitis vinifera]
          Length = 893

 Score =  343 bits (879), Expect = 4e-92
 Identities = 170/312 (54%), Positives = 222/312 (71%), Gaps = 4/312 (1%)
 Frame = +3

Query: 3    TQKNEPFIWTDECEQAFEKLKIRLTTAPVLIVPSSEDSYVVYSDASGKGLGCVLMQNGRV 182
            T+K   F W +ECE AF++LK +LTT PVL  P S + + +Y D S  GLGCVLMQ G+V
Sbjct: 251  TRKGVKFDWNEECENAFQELKRKLTTTPVLTAPISGELFTIYCDVSTVGLGCVLMQQGKV 310

Query: 183  VAYGSRQLKNHEKNYPTHDLELAAIVFALKIWRHYLYGERFEVFSDHKSLKYLFSQKDLN 362
            VAY SRQLK HE+NY THDLELAA+VFALK WRHYLYGE+FEV+SDHKSLKY+F+QKDLN
Sbjct: 311  VAYASRQLKQHERNYLTHDLELAAVVFALKTWRHYLYGEKFEVYSDHKSLKYIFTQKDLN 370

Query: 363  MRQTRWTEFLKDYDYILHYHPGKANVVADALSRRGGSVLA--DLKVWEMLESITTYSFVN 536
             RQ RW E L+DYD+ LHYHPGKANVVADALSR+    L+  +L+ +EM   I  +    
Sbjct: 371  SRQRRWMETLEDYDFALHYHPGKANVVADALSRKNVGQLSSLELREFEMHAVIEDFELCL 430

Query: 537  PTADDTVYVAQMRIQPTLTQRIMDVQVTSP--DFVEFSHKASSVDIPDWAFHSDGSLRFR 710
                    +  +  +P + QRI++ QV     + V+    A  +D  +W+ + DGS+ F+
Sbjct: 431  GLEGHGPCLYSILARPMVIQRIVEAQVHDEFLEKVKAQLVAGEID-ENWSMYEDGSVWFK 489

Query: 711  NRIWVPTDVHLRTDIMDEAHKTRYTIHPGGTKMHKDLRRHF*WPGMKREIAEYISRCLVC 890
             R+ VP DV LR +++ +AHK +YTIHPG TKM++DL+R F   GMKR+IA++++ C +C
Sbjct: 490  GRLCVPKDVGLRNELLADAHKAKYTIHPGNTKMYQDLKRQFWCNGMKRDIAQFVANCQIC 549

Query: 891  QQVKAEHQRPAG 926
            QQVKAEHQRPAG
Sbjct: 550  QQVKAEHQRPAG 561


>emb|CAH66749.1| H0409D10.7 [Oryza sativa Indica Group]
          Length = 1641

 Score =  335 bits (859), Expect = 9e-90
 Identities = 166/309 (53%), Positives = 213/309 (68%), Gaps = 2/309 (0%)
 Frame = +3

Query: 6    QKNEPFIWTDECEQAFEKLKIRLTTAPVLIVPSSEDSYVVYSDASGKGLGCVLMQNGRVV 185
            QK   + WT++CEQ+F+KLK RL TAPVLI+P S   + VY DAS  GLGCVLMQ G+VV
Sbjct: 963  QKEVKYKWTEDCEQSFQKLKKRLVTAPVLILPDSRKDFQVYCDASRLGLGCVLMQEGKVV 1022

Query: 186  AYGSRQLKNHEKNYPTHDLELAAIVFALKIWRHYLYGERFEVFSDHKSLKYLFSQKDLNM 365
            AY SRQL+ HE NYPTHDLELAA+V ALKIWRHYLYG R E+++DHKSLKY+F+Q DLNM
Sbjct: 1023 AYASRQLRPHENNYPTHDLELAAVVHALKIWRHYLYGNRTEIYTDHKSLKYIFTQPDLNM 1082

Query: 366  RQTRWTEFLKDYDYILHYHPGKANVVADALSRRGGSVLADLKV--WEMLESITTYSFVNP 539
            RQ RW E +KDYD  +HYHPGKANVVADALSR+    +++ +   WE+ +    +  +N 
Sbjct: 1083 RQRRWLELIKDYDMEIHYHPGKANVVADALSRKSYCNMSEGRCLPWELCQE---FEKLNL 1139

Query: 540  TADDTVYVAQMRIQPTLTQRIMDVQVTSPDFVEFSHKASSVDIPDWAFHSDGSLRFRNRI 719
                  +VA +  +PTL  +I + QV  PD  E            +     G++    RI
Sbjct: 1140 GIVSKGFVAALEAKPTLFDQIREAQVNDPDIQEIKKNMRRGKAIGFVEDEQGTVWLGERI 1199

Query: 720  WVPTDVHLRTDIMDEAHKTRYTIHPGGTKMHKDLRRHF*WPGMKREIAEYISRCLVCQQV 899
             VP +  L+  IM EAH+T Y+IHPG TKM++DL++ F W  M+REIAEY++ C VCQ+V
Sbjct: 1200 CVPENKELKDTIMKEAHETLYSIHPGSTKMYQDLKQQFWWASMRREIAEYVALCDVCQRV 1259

Query: 900  KAEHQRPAG 926
            KAEHQ+PAG
Sbjct: 1260 KAEHQKPAG 1268


>gb|ABN08587.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 482

 Score =  334 bits (856), Expect = 2e-89
 Identities = 164/309 (53%), Positives = 219/309 (70%), Gaps = 1/309 (0%)
 Frame = +3

Query: 3   TQKNEPFIWTDECEQAFEKLKIRLTTAPVLIVPSSEDSYVVYSDASGKGLGCVLMQNGRV 182
           T K + F+W   CE +F +LK RLTTAPVLI+P S++ +VVY DAS  GLG VLMQ+G+V
Sbjct: 27  TCKGKAFVWDVHCENSFSELKKRLTTAPVLILPKSDELFVVYCDASKLGLGGVLMQDGKV 86

Query: 183 VAYGSRQLKNHEKNYPTHDLELAAIVFALKIWRHYLYGERFEVFSDHKSLKYLFSQKDLN 362
           VAY SRQL+ +EKNYPTHDLELAA+VF LKIWRHYLYG RFEVFSDHKSLKYLF QK+LN
Sbjct: 87  VAYASRQLRIYEKNYPTHDLELAAVVFVLKIWRHYLYGSRFEVFSDHKSLKYLFDQKELN 146

Query: 363 MRQTRWTEFLKDYDYILHYHPGKANVVADALSRRGGSVLA-DLKVWEMLESITTYSFVNP 539
           MRQ RW E LKDYD+ L+YHPGKANVVADALSR+   + A  ++ +E+LE     S V  
Sbjct: 147 MRQRRWLELLKDYDFGLNYHPGKANVVADALSRKTLHMSALMVREFELLEQFRDLSLVCE 206

Query: 540 TADDTVYVAQMRIQPTLTQRIMDVQVTSPDFVEFSHKASSVDIPDWAFHSDGSLRFRNRI 719
            +  +V +  ++I     + I + Q     FV+    ++  +  D+     G LRFR RI
Sbjct: 207 WSPQSVKLGMLKIDSEFLKSIKEAQKVDVKFVDLLVASNQTEDSDFKVDDHGVLRFRGRI 266

Query: 720 WVPTDVHLRTDIMDEAHKTRYTIHPGGTKMHKDLRRHF*WPGMKREIAEYISRCLVCQQV 899
            +P D  ++  I++E+H++  +IHPG TKM+ +L++ F W G+KR++A+++  CLVCQ+ 
Sbjct: 267 CIPDDAEMKKMILEESHRSSLSIHPGATKMYHNLKKIFWWSGLKRDVAQFVYSCLVCQKS 326

Query: 900 KAEHQRPAG 926
           K EHQ+PAG
Sbjct: 327 KIEHQKPAG 335