BLASTX nr result

ID: Coptis23_contig00038038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038038
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264...    66   3e-09
emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]    65   7e-09
ref|XP_002307329.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
ref|XP_002527364.1| conserved hypothetical protein [Ricinus comm...    61   1e-07
ref|XP_003544251.1| PREDICTED: uncharacterized protein LOC100787...    60   1e-07

>ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264337 [Vitis vinifera]
          Length = 431

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 32/83 (38%), Positives = 46/83 (55%)
 Frame = +2

Query: 80  WVKWSKPPDGLVVLNSDGSVQKERASYGGAVRDWNGDALMAYNGSSTRMSVLYQELLGVQ 259
           W  W KP  G   LN+DGS+ +  A +GG  RD NGD + AY   + +  +   EL  + 
Sbjct: 265 WYSWEKPEFGWTKLNTDGSIDRGNAGFGGLFRDHNGDPICAYASKAHQNDIFLVELWAIW 324

Query: 260 KGLEGAAHMRISRIQVQSDSLRA 328
           +GL  A+ + I  I V+SDS+ A
Sbjct: 325 RGLVLASGLGIKAIWVESDSMSA 347


>emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]
          Length = 318

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 31/81 (38%), Positives = 45/81 (55%)
 Frame = +2

Query: 80  WVKWSKPPDGLVVLNSDGSVQKERASYGGAVRDWNGDALMAYNGSSTRMSVLYQELLGVQ 259
           W  W KP  G   LN+DGS+ +  A +GG  RD NGD + AY   + +  +   EL  + 
Sbjct: 152 WYSWEKPEFGWTKLNTDGSIDRGNAGFGGLFRDHNGDPICAYASKAHQNDIFLVELWAIW 211

Query: 260 KGLEGAAHMRISRIQVQSDSL 322
           +GL  A+ + I  I V+SDS+
Sbjct: 212 RGLVLASGLGIKAIWVESDSM 232


>ref|XP_002307329.1| predicted protein [Populus trichocarpa] gi|222856778|gb|EEE94325.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/81 (34%), Positives = 46/81 (56%)
 Frame = +2

Query: 80  WVKWSKPPDGLVVLNSDGSVQKERASYGGAVRDWNGDALMAYNGSSTRMSVLYQELLGVQ 259
           W +W +P  G + LN+DGS+  E A  GG  RD+ G+A+  +   ++   +   EL  + 
Sbjct: 164 WCQWKRPDFGWIKLNTDGSIDSENAGIGGLFRDYEGNAICGFVSKASGHDIFLVELWAIW 223

Query: 260 KGLEGAAHMRISRIQVQSDSL 322
           +GL  A ++ I  + V+SDSL
Sbjct: 224 RGLVLALNLHIQVLWVESDSL 244


>ref|XP_002527364.1| conserved hypothetical protein [Ricinus communis]
           gi|223533283|gb|EEF35036.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 437

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 31/83 (37%), Positives = 47/83 (56%)
 Frame = +2

Query: 80  WVKWSKPPDGLVVLNSDGSVQKERASYGGAVRDWNGDALMAYNGSSTRMSVLYQELLGVQ 259
           W  W KP  G + LN+DGSV ++ A +GG +RD  G+A+ A+   +    +   EL  + 
Sbjct: 271 WCIWKKPDVGWIKLNTDGSVDRQHAGFGGLLRDNEGNAICAFVSKAPLDDIFLVELWAIW 330

Query: 260 KGLEGAAHMRISRIQVQSDSLRA 328
           +GL  A  + I  I V+SDS+ A
Sbjct: 331 RGLVLALGLGIKVIWVESDSMSA 353


>ref|XP_003544251.1| PREDICTED: uncharacterized protein LOC100787629 [Glycine max]
          Length = 470

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 28/81 (34%), Positives = 46/81 (56%)
 Frame = +2

Query: 80  WVKWSKPPDGLVVLNSDGSVQKERASYGGAVRDWNGDALMAYNGSSTRMSVLYQELLGVQ 259
           W +W+KP  G   LN+DGS+     S+GG +RD+ G+ + A+   + +  V   EL  + 
Sbjct: 305 WCEWTKPEFGWTKLNTDGSIHSNTVSFGGLLRDYRGEPICAFVSKAPQGDVFLAELWAIW 364

Query: 260 KGLEGAAHMRISRIQVQSDSL 322
           +GL  +  + I  I V+SDS+
Sbjct: 365 RGLVLSLGLGIKAIWVESDSM 385


Top