BLASTX nr result

ID: Coptis23_contig00038036 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038036
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632052.1| PREDICTED: probable glucan endo-1,3-beta-glu...   116   2e-24
gb|ACR37660.1| unknown [Zea mays]                                     108   5e-22
gb|ACN28576.1| unknown [Zea mays]                                     108   5e-22
ref|NP_001149815.1| glucan endo-1,3-beta-glucosidase A6 precurso...   108   5e-22
ref|XP_002298669.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21

>ref|XP_003632052.1| PREDICTED: probable glucan endo-1,3-beta-glucosidase A6-like [Vitis
           vinifera] gi|296089651|emb|CBI39470.3| unnamed protein
           product [Vitis vinifera]
          Length = 467

 Score =  116 bits (290), Expect = 2e-24
 Identities = 51/84 (60%), Positives = 65/84 (77%)
 Frame = -2

Query: 254 VDLTGKQTESDYDPIPLGTNNAPYRGKIWCVVARDREVSE*ELGDAISYACGQGNGTCKA 75
           +DLTG+  ES+Y P+P   NN PY+GKIWCVVA+    +E  LG A++YACGQGNGTC+ 
Sbjct: 350 IDLTGETPESEYPPLPAPENNEPYKGKIWCVVAKGANRTE--LGSALTYACGQGNGTCEP 407

Query: 74  LQPGKDCYTPVNLVSHTSYAFSSY 3
           +QPG+ CY PV+LV H S+AFSSY
Sbjct: 408 VQPGRKCYKPVSLVRHASFAFSSY 431


>gb|ACR37660.1| unknown [Zea mays]
          Length = 225

 Score =  108 bits (270), Expect = 5e-22
 Identities = 47/86 (54%), Positives = 62/86 (72%), Gaps = 2/86 (2%)
 Frame = -2

Query: 254 VDLTGKQTESDYDPIPLGTNNAPYRGKIWCVV--ARDREVSE*ELGDAISYACGQGNGTC 81
           +DLTG++    Y P+P   NN PY+G IWCV+  A   +++E  +G+A+SYACGQGNGTC
Sbjct: 102 IDLTGRRPLGSYPPLPAPENNTPYKGPIWCVLSAAASNKLNETAVGNALSYACGQGNGTC 161

Query: 80  KALQPGKDCYTPVNLVSHTSYAFSSY 3
            A+QPGK CYTP    +H SYAF+SY
Sbjct: 162 DAIQPGKTCYTPNTTAAHASYAFNSY 187


>gb|ACN28576.1| unknown [Zea mays]
          Length = 335

 Score =  108 bits (270), Expect = 5e-22
 Identities = 47/86 (54%), Positives = 62/86 (72%), Gaps = 2/86 (2%)
 Frame = -2

Query: 254 VDLTGKQTESDYDPIPLGTNNAPYRGKIWCVV--ARDREVSE*ELGDAISYACGQGNGTC 81
           +DLTG++    Y P+P   NN PY+G IWCV+  A   +++E  +G+A+SYACGQGNGTC
Sbjct: 212 IDLTGRRPLGSYPPLPAPENNTPYKGPIWCVLSAAASNKLNETAVGNALSYACGQGNGTC 271

Query: 80  KALQPGKDCYTPVNLVSHTSYAFSSY 3
            A+QPGK CYTP    +H SYAF+SY
Sbjct: 272 DAIQPGKTCYTPNTTAAHASYAFNSY 297


>ref|NP_001149815.1| glucan endo-1,3-beta-glucosidase A6 precursor [Zea mays]
           gi|195634843|gb|ACG36890.1| glucan
           endo-1,3-beta-glucosidase A6 precursor [Zea mays]
           gi|414886190|tpg|DAA62204.1| TPA: putative O-Glycosyl
           hydrolase superfamily protein [Zea mays]
          Length = 479

 Score =  108 bits (270), Expect = 5e-22
 Identities = 47/86 (54%), Positives = 62/86 (72%), Gaps = 2/86 (2%)
 Frame = -2

Query: 254 VDLTGKQTESDYDPIPLGTNNAPYRGKIWCVV--ARDREVSE*ELGDAISYACGQGNGTC 81
           +DLTG++    Y P+P   NN PY+G IWCV+  A   +++E  +G+A+SYACGQGNGTC
Sbjct: 356 IDLTGRRPLGSYPPLPAPENNTPYKGPIWCVLSAAASNKLNETAVGNALSYACGQGNGTC 415

Query: 80  KALQPGKDCYTPVNLVSHTSYAFSSY 3
            A+QPGK CYTP    +H SYAF+SY
Sbjct: 416 DAIQPGKTCYTPNTTAAHASYAFNSY 441


>ref|XP_002298669.1| predicted protein [Populus trichocarpa] gi|222845927|gb|EEE83474.1|
           predicted protein [Populus trichocarpa]
          Length = 462

 Score =  106 bits (265), Expect = 2e-21
 Identities = 46/84 (54%), Positives = 62/84 (73%)
 Frame = -2

Query: 254 VDLTGKQTESDYDPIPLGTNNAPYRGKIWCVVARDREVSE*ELGDAISYACGQGNGTCKA 75
           +DLTGK+  SDY+ +P   NN PY+GK+WC+ A   EV+  EL  A+++AC QGNGTC +
Sbjct: 345 IDLTGKRASSDYETLPPAQNNVPYKGKLWCIAAP--EVNLTELESALTFACNQGNGTCDS 402

Query: 74  LQPGKDCYTPVNLVSHTSYAFSSY 3
           L PGK+CY P+++  H SYAFSSY
Sbjct: 403 LTPGKECYEPLSVTWHASYAFSSY 426


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