BLASTX nr result

ID: Coptis23_contig00038035 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038035
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002608356.1| ribosomal protein S14 [Vitis vinifera] gi|20...   155   2e-36
ref|YP_006460159.1| ribosomal protein subunit S14 (mitochondrion...   154   7e-36
gb|ABD42934.1| ribosomal protein S14 [Juncus effusus]                 154   9e-36
ref|YP_002608213.1| ribosomal protein S14 [Carica papaya] gi|170...   153   1e-35
gb|ABD42933.1| ribosomal protein S14 [Guzmania lingulata]             153   1e-35

>ref|YP_002608356.1| ribosomal protein S14 [Vitis vinifera] gi|209954152|emb|CAQ77588.1|
           ribosomal protein S14 [Vitis vinifera]
           gi|239764776|gb|ACS15244.1| ribosomal protein S14 [Vitis
           vinifera]
          Length = 118

 Score =  155 bits (393), Expect = 2e-36
 Identities = 75/77 (97%), Positives = 75/77 (97%)
 Frame = -2

Query: 275 KLYKAFCKDPDLPSDMRDKHRYKLSKLPRNSSFARVRNRCIFTGRPRSVYEFFRISRIVF 96
           KLYKAFCKDPDLPSDMRDKHRYKLSKLPRNSSFARVRNRCI TGRPRSVYEFFRISRIVF
Sbjct: 42  KLYKAFCKDPDLPSDMRDKHRYKLSKLPRNSSFARVRNRCISTGRPRSVYEFFRISRIVF 101

Query: 95  RGLASRGSLMGIKKSSW 45
           RGLASRG LMGIKKSSW
Sbjct: 102 RGLASRGPLMGIKKSSW 118


>ref|YP_006460159.1| ribosomal protein subunit S14 (mitochondrion) [Mimulus guttatus]
           gi|340007669|gb|AEK26533.1| ribosomal protein subunit
           S14 (mitochondrion) [Mimulus guttatus]
          Length = 100

 Score =  154 bits (389), Expect = 7e-36
 Identities = 74/77 (96%), Positives = 75/77 (97%)
 Frame = -2

Query: 275 KLYKAFCKDPDLPSDMRDKHRYKLSKLPRNSSFARVRNRCIFTGRPRSVYEFFRISRIVF 96
           KLYKAFCKDPDLPSDMRDKHRYKLSKLPRNSSFARVRNRCI TGRPRSVY+FFRISRIVF
Sbjct: 24  KLYKAFCKDPDLPSDMRDKHRYKLSKLPRNSSFARVRNRCISTGRPRSVYKFFRISRIVF 83

Query: 95  RGLASRGSLMGIKKSSW 45
           RGLASRG LMGIKKSSW
Sbjct: 84  RGLASRGPLMGIKKSSW 100


>gb|ABD42934.1| ribosomal protein S14 [Juncus effusus]
          Length = 100

 Score =  154 bits (388), Expect = 9e-36
 Identities = 73/77 (94%), Positives = 75/77 (97%)
 Frame = -2

Query: 275 KLYKAFCKDPDLPSDMRDKHRYKLSKLPRNSSFARVRNRCIFTGRPRSVYEFFRISRIVF 96
           KLYKA C+DPDLPSDMRDKHRYKLSKLPRNSSF RVRNRCI+TGRPRSVYEFFRISRIVF
Sbjct: 24  KLYKALCQDPDLPSDMRDKHRYKLSKLPRNSSFLRVRNRCIYTGRPRSVYEFFRISRIVF 83

Query: 95  RGLASRGSLMGIKKSSW 45
           RGLASRGSLMGIKKSSW
Sbjct: 84  RGLASRGSLMGIKKSSW 100


>ref|YP_002608213.1| ribosomal protein S14 [Carica papaya] gi|170522392|gb|ACB20502.1|
           ribosomal protein S14 (mitochondrion) [Carica papaya]
          Length = 100

 Score =  153 bits (387), Expect = 1e-35
 Identities = 74/77 (96%), Positives = 74/77 (96%)
 Frame = -2

Query: 275 KLYKAFCKDPDLPSDMRDKHRYKLSKLPRNSSFARVRNRCIFTGRPRSVYEFFRISRIVF 96
           KLYKAFCKDPDLPSDMRDKHRYKLSKLPR SSFARVRNRCI TGRPRSVYEFFRISRIVF
Sbjct: 24  KLYKAFCKDPDLPSDMRDKHRYKLSKLPRKSSFARVRNRCISTGRPRSVYEFFRISRIVF 83

Query: 95  RGLASRGSLMGIKKSSW 45
           RGLASRG LMGIKKSSW
Sbjct: 84  RGLASRGPLMGIKKSSW 100


>gb|ABD42933.1| ribosomal protein S14 [Guzmania lingulata]
          Length = 92

 Score =  153 bits (387), Expect = 1e-35
 Identities = 74/77 (96%), Positives = 74/77 (96%)
 Frame = -2

Query: 275 KLYKAFCKDPDLPSDMRDKHRYKLSKLPRNSSFARVRNRCIFTGRPRSVYEFFRISRIVF 96
           KLYKAFCKDPDLPSDMRDKHRYKLSKLPRNSS ARVRNRCIFTGRPRSV EFFRISRIVF
Sbjct: 16  KLYKAFCKDPDLPSDMRDKHRYKLSKLPRNSSMARVRNRCIFTGRPRSVVEFFRISRIVF 75

Query: 95  RGLASRGSLMGIKKSSW 45
           RGLASRG LMGIKKSSW
Sbjct: 76  RGLASRGPLMGIKKSSW 92


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