BLASTX nr result
ID: Coptis23_contig00038031
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00038031
(533 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002892901.1| hypothetical protein ARALYDRAFT_312606 [Arab... 105 3e-21
gb|AAD34680.1|AC006341_8 Contains a PF|01464 Transglycosylase SL... 102 4e-20
ref|NP_173079.2| uncharacterized protein [Arabidopsis thaliana] ... 102 4e-20
ref|XP_002266113.2| PREDICTED: uncharacterized protein LOC100254... 102 5e-20
ref|XP_002316147.1| predicted protein [Populus trichocarpa] gi|2... 100 1e-19
>ref|XP_002892901.1| hypothetical protein ARALYDRAFT_312606 [Arabidopsis lyrata subsp.
lyrata] gi|297338743|gb|EFH69160.1| hypothetical protein
ARALYDRAFT_312606 [Arabidopsis lyrata subsp. lyrata]
Length = 458
Score = 105 bits (263), Expect = 3e-21
Identities = 52/69 (75%), Positives = 56/69 (81%)
Frame = +1
Query: 286 YWDSRASPEDMEDLWKHSNVLKEWVMSGEK*GKV*FSLDAEKRPYLSRHELKAVAEIIVS 465
YWDSRASPEDMED+W HS V KEW S E+ GKV FS D EKRPYLSR ELKAVAEIIVS
Sbjct: 225 YWDSRASPEDMEDMWNHSEVCKEWTKSKEERGKVRFSQDGEKRPYLSRGELKAVAEIIVS 284
Query: 466 KHFSTGEIK 492
K+FST I+
Sbjct: 285 KYFSTKGIR 293
Score = 59.3 bits (142), Expect = 3e-07
Identities = 27/72 (37%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Frame = +1
Query: 268 VGDAWKYWDSRASPEDMEDLWKHSNVLKEWVMSGEK*G-KV*FSLDAEKRPYLSRHELKA 444
+ +++ +W+ PED+E++W V EW+ GE G KV S D + +PYL++ E++A
Sbjct: 1 MANSFTFWNDCVEPEDLEEMWMDPAVSAEWIDVGETKGQKVHLSRDPDGQPYLTQTEMRA 60
Query: 445 VAEIIVSKHFST 480
VA+I V +HF +
Sbjct: 61 VADITVRRHFDS 72
>gb|AAD34680.1|AC006341_8 Contains a PF|01464 Transglycosylase SLT domain [Arabidopsis
thaliana]
Length = 455
Score = 102 bits (254), Expect = 4e-20
Identities = 50/69 (72%), Positives = 55/69 (79%)
Frame = +1
Query: 286 YWDSRASPEDMEDLWKHSNVLKEWVMSGEK*GKV*FSLDAEKRPYLSRHELKAVAEIIVS 465
YWDSRASPEDMED+W S + KEW S E+ GKV FS D EKRPYLSR ELKAVAEIIVS
Sbjct: 225 YWDSRASPEDMEDMWNQSEICKEWTKSKEERGKVRFSQDGEKRPYLSRGELKAVAEIIVS 284
Query: 466 KHFSTGEIK 492
K+FST I+
Sbjct: 285 KYFSTKGIR 293
Score = 58.2 bits (139), Expect = 8e-07
Identities = 26/72 (36%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Frame = +1
Query: 268 VGDAWKYWDSRASPEDMEDLWKHSNVLKEWVMSGEK*G-KV*FSLDAEKRPYLSRHELKA 444
+ +++ +W+ PED+E++W V EW+ GE G KV S D + +PYL++ E++A
Sbjct: 1 MANSFTFWNDCVEPEDLEEMWMDPAVSAEWIDVGETKGQKVHLSRDPDGQPYLTQTEMRA 60
Query: 445 VAEIIVSKHFST 480
V++I V +HF +
Sbjct: 61 VSDITVRRHFDS 72
>ref|NP_173079.2| uncharacterized protein [Arabidopsis thaliana]
gi|119935884|gb|ABM06023.1| At1g16290 [Arabidopsis
thaliana] gi|332191311|gb|AEE29432.1| uncharacterized
protein [Arabidopsis thaliana]
Length = 419
Score = 102 bits (254), Expect = 4e-20
Identities = 50/69 (72%), Positives = 55/69 (79%)
Frame = +1
Query: 286 YWDSRASPEDMEDLWKHSNVLKEWVMSGEK*GKV*FSLDAEKRPYLSRHELKAVAEIIVS 465
YWDSRASPEDMED+W S + KEW S E+ GKV FS D EKRPYLSR ELKAVAEIIVS
Sbjct: 225 YWDSRASPEDMEDMWNQSEICKEWTKSKEERGKVRFSQDGEKRPYLSRGELKAVAEIIVS 284
Query: 466 KHFSTGEIK 492
K+FST I+
Sbjct: 285 KYFSTKGIR 293
Score = 58.2 bits (139), Expect = 8e-07
Identities = 26/72 (36%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Frame = +1
Query: 268 VGDAWKYWDSRASPEDMEDLWKHSNVLKEWVMSGEK*G-KV*FSLDAEKRPYLSRHELKA 444
+ +++ +W+ PED+E++W V EW+ GE G KV S D + +PYL++ E++A
Sbjct: 1 MANSFTFWNDCVEPEDLEEMWMDPAVSAEWIDVGETKGQKVHLSRDPDGQPYLTQTEMRA 60
Query: 445 VAEIIVSKHFST 480
V++I V +HF +
Sbjct: 61 VSDITVRRHFDS 72
>ref|XP_002266113.2| PREDICTED: uncharacterized protein LOC100254368 [Vitis vinifera]
gi|296082756|emb|CBI21761.3| unnamed protein product
[Vitis vinifera]
Length = 422
Score = 102 bits (253), Expect = 5e-20
Identities = 48/69 (69%), Positives = 57/69 (82%)
Frame = +1
Query: 286 YWDSRASPEDMEDLWKHSNVLKEWVMSGEK*GKV*FSLDAEKRPYLSRHELKAVAEIIVS 465
+WDSRASPEDM+++W H +VLKEW GE GKV FS D EKRPYLSR E+KAVAEII+S
Sbjct: 228 FWDSRASPEDMDEMWNHPDVLKEWSKCGEIRGKVLFSHDKEKRPYLSRVEVKAVAEIILS 287
Query: 466 KHFSTGEIK 492
KHFST ++K
Sbjct: 288 KHFSTRQVK 296
Score = 64.7 bits (156), Expect = 8e-09
Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Frame = +1
Query: 277 AWKYWDSRASPEDMEDLWKHSNVLKEWVMSGEK*G-KV*FSLDAEKRPYLSRHELKAVAE 453
++KYWD P D+E LW +V EW+ GE G KV S D + PYL++ E+KAVA
Sbjct: 4 SYKYWDDCVDPRDLEALWLDPDVSTEWLDVGETRGRKVHLSRDPDGEPYLTQIEMKAVAA 63
Query: 454 IIVSKHFST 480
I+VS+HF +
Sbjct: 64 IVVSRHFDS 72
>ref|XP_002316147.1| predicted protein [Populus trichocarpa] gi|222865187|gb|EEF02318.1|
predicted protein [Populus trichocarpa]
Length = 455
Score = 100 bits (250), Expect = 1e-19
Identities = 47/77 (61%), Positives = 59/77 (76%)
Frame = +1
Query: 265 EVGDAWKYWDSRASPEDMEDLWKHSNVLKEWVMSGEK*GKV*FSLDAEKRPYLSRHELKA 444
E G + YWDS+ASPE+M+++W S V KEW SGEK GKV FS D + +PYLSR E+KA
Sbjct: 254 EAGVDYIYWDSKASPEEMQEMWSRSEVAKEWTKSGEKRGKVRFSHDKDMKPYLSRVEMKA 313
Query: 445 VAEIIVSKHFSTGEIKP 495
VA+II+SKHFST +KP
Sbjct: 314 VADIILSKHFSTRGVKP 330
Score = 60.8 bits (146), Expect = 1e-07
Identities = 31/74 (41%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Frame = +1
Query: 277 AWKYWDSRASPEDMEDLWKHSNVLKEWVMSGEK*G-KV*FSLDAEKRPYLSRHELKAVAE 453
++ YW+ +DME +W+ V EW+ +GE G KV S D + PYL++ E+KAVA+
Sbjct: 4 SFDYWNDCVDVQDMEAMWQEPEVSTEWLDAGETKGNKVHLSRDPDGEPYLTQTEMKAVAD 63
Query: 454 IIVSKHFSTGEIKP 495
IIV +HF + +I+P
Sbjct: 64 IIVRRHFDS-QIQP 76