BLASTX nr result

ID: Coptis23_contig00038029 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038029
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321596.1| predicted protein [Populus trichocarpa] gi|2...   143   1e-32
ref|XP_002334881.1| predicted protein [Populus trichocarpa] gi|2...   143   1e-32
ref|XP_003597218.1| Beta-galactosidase [Medicago truncatula] gi|...   120   2e-25
emb|CAN73014.1| hypothetical protein VITISV_007603 [Vitis vinifera]    66   3e-09
emb|CAN75071.1| hypothetical protein VITISV_011695 [Vitis vinifera]    62   4e-08

>ref|XP_002321596.1| predicted protein [Populus trichocarpa] gi|222868592|gb|EEF05723.1|
           predicted protein [Populus trichocarpa]
          Length = 236

 Score =  143 bits (361), Expect = 1e-32
 Identities = 67/75 (89%), Positives = 71/75 (94%)
 Frame = -2

Query: 229 DNCMIKSWLLDAMNKEIRSIFLRLSTVKEIWDMAKQTYSVSQDASKSYQLYCEVISVCQN 50
           +NC+IKSWLLDAMNK+IRSIFLRL T KEIWDMAKQTYSVSQDASKSYQLYCEVISV QN
Sbjct: 82  ENCLIKSWLLDAMNKDIRSIFLRLPTAKEIWDMAKQTYSVSQDASKSYQLYCEVISVRQN 141

Query: 49  GGFVISYWGKLQKLW 5
           GG +ISYWGKLQKLW
Sbjct: 142 GGSIISYWGKLQKLW 156


>ref|XP_002334881.1| predicted protein [Populus trichocarpa] gi|222831996|gb|EEE70473.1|
           predicted protein [Populus trichocarpa]
          Length = 204

 Score =  143 bits (361), Expect = 1e-32
 Identities = 67/75 (89%), Positives = 71/75 (94%)
 Frame = -2

Query: 229 DNCMIKSWLLDAMNKEIRSIFLRLSTVKEIWDMAKQTYSVSQDASKSYQLYCEVISVCQN 50
           +NC+IKSWLLDAMNK+IRSIFLRL T KEIWDMAKQTYSVSQDASKSYQLYCEVISV QN
Sbjct: 82  ENCLIKSWLLDAMNKDIRSIFLRLPTAKEIWDMAKQTYSVSQDASKSYQLYCEVISVRQN 141

Query: 49  GGFVISYWGKLQKLW 5
           GG +ISYWGKLQKLW
Sbjct: 142 GGSIISYWGKLQKLW 156


>ref|XP_003597218.1| Beta-galactosidase [Medicago truncatula]
           gi|355486266|gb|AES67469.1| Beta-galactosidase [Medicago
           truncatula]
          Length = 2260

 Score =  120 bits (300), Expect = 2e-25
 Identities = 51/75 (68%), Positives = 67/75 (89%)
 Frame = -2

Query: 229 DNCMIKSWLLDAMNKEIRSIFLRLSTVKEIWDMAKQTYSVSQDASKSYQLYCEVISVCQN 50
           +NC++KSWLLDAM K++RS+F+RL T K+IW+  K+TYSVSQDASK+YQLYCEVIS+ Q+
Sbjct: 589 ENCLVKSWLLDAMTKDVRSLFIRLPTAKKIWESVKETYSVSQDASKAYQLYCEVISIKQD 648

Query: 49  GGFVISYWGKLQKLW 5
           GG V++Y+ KLQKLW
Sbjct: 649 GGSVVTYFAKLQKLW 663


>emb|CAN73014.1| hypothetical protein VITISV_007603 [Vitis vinifera]
          Length = 1121

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 31/75 (41%), Positives = 45/75 (60%)
 Frame = -2

Query: 229 DNCMIKSWLLDAMNKEIRSIFLRLSTVKEIWDMAKQTYSVSQDASKSYQLYCEVISVCQN 50
           +N MI SWL+++MN +I  IFL   T K+IWD AK+TYS S++ SK +Q+   +    Q 
Sbjct: 235 ENSMIMSWLINSMNNDIGEIFLLFGTAKDIWDAAKETYSSSENTSKLFQVESALHDFRQG 294

Query: 49  GGFVISYWGKLQKLW 5
              V  Y+  L + W
Sbjct: 295 EQTVTQYYNTLTRYW 309


>emb|CAN75071.1| hypothetical protein VITISV_011695 [Vitis vinifera]
          Length = 264

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 28/75 (37%), Positives = 43/75 (57%)
 Frame = -2

Query: 229 DNCMIKSWLLDAMNKEIRSIFLRLSTVKEIWDMAKQTYSVSQDASKSYQLYCEVISVCQN 50
           +N M+K WL+++M+  +   F+R  T K++WD A  TY    D S+ Y+L   V  + Q 
Sbjct: 51  ENAMVKGWLINSMDHSLVMNFIRYPTAKQVWDSAATTYFDGTDTSQVYELRRRVSQMKQV 110

Query: 49  GGFVISYWGKLQKLW 5
           GG +  Y+  LQ LW
Sbjct: 111 GGSIEKYYNNLQGLW 125


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