BLASTX nr result

ID: Coptis23_contig00038018 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038018
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518240.1| ATP binding protein, putative [Ricinus commu...    64   1e-08
ref|XP_003631778.1| PREDICTED: U-box domain-containing protein 3...    64   2e-08
emb|CBI20806.3| unnamed protein product [Vitis vinifera]               64   2e-08
emb|CAN69465.1| hypothetical protein VITISV_023046 [Vitis vinifera]    64   2e-08
ref|XP_004144908.1| PREDICTED: U-box domain-containing protein 3...    57   1e-07

>ref|XP_002518240.1| ATP binding protein, putative [Ricinus communis]
           gi|223542587|gb|EEF44126.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 802

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 31/50 (62%), Positives = 40/50 (80%)
 Frame = -1

Query: 257 FCLLKCSSQITCRDIVLEDIDVAKALIEYVSHSAIETLVVGASSKNGLFR 108
           FC  K    I C+D+VLE+ D+AKAL+EY + +AIETLVVGAS+K+GLFR
Sbjct: 103 FCTRK---DIQCKDVVLEETDIAKALVEYATRTAIETLVVGASNKSGLFR 149


>ref|XP_003631778.1| PREDICTED: U-box domain-containing protein 35-like [Vitis vinifera]
          Length = 796

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/50 (64%), Positives = 36/50 (72%)
 Frame = -1

Query: 257 FCLLKCSSQITCRDIVLEDIDVAKALIEYVSHSAIETLVVGASSKNGLFR 108
           FC  K    I C+D++LED DV KALIEYVSHSAIE LVVGA +K G  R
Sbjct: 84  FCTRK---DIQCKDVILEDTDVVKALIEYVSHSAIEVLVVGAPAKGGFLR 130


>emb|CBI20806.3| unnamed protein product [Vitis vinifera]
          Length = 1126

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/50 (64%), Positives = 36/50 (72%)
 Frame = -1

Query: 257 FCLLKCSSQITCRDIVLEDIDVAKALIEYVSHSAIETLVVGASSKNGLFR 108
           FC  K    I C+D++LED DV KALIEYVSHSAIE LVVGA +K G  R
Sbjct: 498 FCTRK---DIQCKDVILEDTDVVKALIEYVSHSAIEVLVVGAPAKGGFLR 544


>emb|CAN69465.1| hypothetical protein VITISV_023046 [Vitis vinifera]
          Length = 768

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/50 (64%), Positives = 36/50 (72%)
 Frame = -1

Query: 257 FCLLKCSSQITCRDIVLEDIDVAKALIEYVSHSAIETLVVGASSKNGLFR 108
           FC  K    I C+D++LED DV KALIEYVSHSAIE LVVGA +K G  R
Sbjct: 84  FCTRK---DIQCKDVILEDTDVVKALIEYVSHSAIEVLVVGAPAKGGFLR 130


>ref|XP_004144908.1| PREDICTED: U-box domain-containing protein 35-like [Cucumis
           sativus]
          Length = 888

 Score = 56.6 bits (135), Expect(2) = 1e-07
 Identities = 26/41 (63%), Positives = 33/41 (80%)
 Frame = -1

Query: 230 ITCRDIVLEDIDVAKALIEYVSHSAIETLVVGASSKNGLFR 108
           I C DI+LED D+ KAL EYVS++AIETLV+GA S++G  R
Sbjct: 112 IQCLDIILEDTDIVKALTEYVSYAAIETLVLGAPSRHGFIR 152



 Score = 24.3 bits (51), Expect(2) = 1e-07
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -2

Query: 313 FRCFCTRKDV 284
           F C+CTRKD+
Sbjct: 103 FHCYCTRKDI 112


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