BLASTX nr result

ID: Coptis23_contig00038013 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038013
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31845.3| unnamed protein product [Vitis vinifera]              114   6e-24
ref|XP_002280043.1| PREDICTED: ethylene-responsive transcription...   114   6e-24
dbj|BAK09567.1| AP2/ERF domain-containing protein [Populus nigra]     110   2e-22
ref|XP_002510845.1| Dehydration-responsive element-binding prote...   108   6e-22
ref|XP_002318847.1| AP2/ERF domain-containing transcription fact...   108   6e-22

>emb|CBI31845.3| unnamed protein product [Vitis vinifera]
          Length = 273

 Score =  114 bits (286), Expect = 6e-24
 Identities = 60/93 (64%), Positives = 65/93 (69%), Gaps = 7/93 (7%)
 Frame = -3

Query: 262 SIPTSENPSPK----PTIM---TSGKHPTYRGIRSRSGKWVSEIREPRKTTRIWLGTFPT 104
           S PTS +PSPK    PT     T+G+HP YRGIR R  KWVSEIREPRKTTRIWLGT+PT
Sbjct: 64  STPTSAHPSPKNLPSPTPFSGQTAGRHPFYRGIRCRGNKWVSEIREPRKTTRIWLGTYPT 123

Query: 103 PEMXXXXXXXXXXALKGTDAVLNFPESISSYPI 5
           PEM          ALKGTDA LNFP S+ SYPI
Sbjct: 124 PEMAATAYDVAALALKGTDATLNFPNSVLSYPI 156


>ref|XP_002280043.1| PREDICTED: ethylene-responsive transcription factor ERF025-like
           [Vitis vinifera]
          Length = 237

 Score =  114 bits (286), Expect = 6e-24
 Identities = 60/93 (64%), Positives = 65/93 (69%), Gaps = 7/93 (7%)
 Frame = -3

Query: 262 SIPTSENPSPK----PTIM---TSGKHPTYRGIRSRSGKWVSEIREPRKTTRIWLGTFPT 104
           S PTS +PSPK    PT     T+G+HP YRGIR R  KWVSEIREPRKTTRIWLGT+PT
Sbjct: 44  STPTSAHPSPKNLPSPTPFSGQTAGRHPFYRGIRCRGNKWVSEIREPRKTTRIWLGTYPT 103

Query: 103 PEMXXXXXXXXXXALKGTDAVLNFPESISSYPI 5
           PEM          ALKGTDA LNFP S+ SYPI
Sbjct: 104 PEMAATAYDVAALALKGTDATLNFPNSVLSYPI 136


>dbj|BAK09567.1| AP2/ERF domain-containing protein [Populus nigra]
          Length = 282

 Score =  110 bits (274), Expect = 2e-22
 Identities = 52/74 (70%), Positives = 58/74 (78%)
 Frame = -3

Query: 226 TIMTSGKHPTYRGIRSRSGKWVSEIREPRKTTRIWLGTFPTPEMXXXXXXXXXXALKGTD 47
           T+ TSG+HP+Y+GIR RSGKWVSEIREPRKTTR+WLGT+PTPEM          ALKG D
Sbjct: 106 TLPTSGRHPSYKGIRLRSGKWVSEIREPRKTTRVWLGTYPTPEMAAAAYDAAALALKGPD 165

Query: 46  AVLNFPESISSYPI 5
             LNFPESI SYPI
Sbjct: 166 TPLNFPESILSYPI 179


>ref|XP_002510845.1| Dehydration-responsive element-binding protein 1B, putative
           [Ricinus communis] gi|223549960|gb|EEF51447.1|
           Dehydration-responsive element-binding protein 1B,
           putative [Ricinus communis]
          Length = 224

 Score =  108 bits (269), Expect = 6e-22
 Identities = 55/86 (63%), Positives = 59/86 (68%), Gaps = 6/86 (6%)
 Frame = -3

Query: 244 NPSPKPTIMT------SGKHPTYRGIRSRSGKWVSEIREPRKTTRIWLGTFPTPEMXXXX 83
           NPSP+P          +G+HP YRGIR RSGKWVSEIREPRKTTRIWLGT+ TPEM    
Sbjct: 34  NPSPRPVRSPGASSGQTGRHPIYRGIRCRSGKWVSEIREPRKTTRIWLGTYTTPEMAAAA 93

Query: 82  XXXXXXALKGTDAVLNFPESISSYPI 5
                 ALKG D  LNFPESI SYPI
Sbjct: 94  YDVAALALKGPDTALNFPESILSYPI 119


>ref|XP_002318847.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|222859520|gb|EEE97067.1| AP2/ERF
           domain-containing transcription factor [Populus
           trichocarpa]
          Length = 282

 Score =  108 bits (269), Expect = 6e-22
 Identities = 51/71 (71%), Positives = 56/71 (78%)
 Frame = -3

Query: 217 TSGKHPTYRGIRSRSGKWVSEIREPRKTTRIWLGTFPTPEMXXXXXXXXXXALKGTDAVL 38
           TSG+HP+Y+GIR RSGKWVSEIREPRKTTR+WLGT+PTPEM          ALKG D  L
Sbjct: 109 TSGRHPSYKGIRLRSGKWVSEIREPRKTTRVWLGTYPTPEMAAAAYDAAALALKGPDTPL 168

Query: 37  NFPESISSYPI 5
           NFPESI SYPI
Sbjct: 169 NFPESILSYPI 179


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