BLASTX nr result

ID: Coptis23_contig00038005 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038005
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274846.1| PREDICTED: calmodulin-binding transcription ...   123   1e-26
gb|AEX07777.1| calmodulin-binding transcription factor SR4 [Sola...   120   1e-25
ref|XP_003550574.1| PREDICTED: calmodulin-binding transcription ...   114   6e-24
ref|XP_002519300.1| calmodulin-binding transcription activator (...   107   8e-22
ref|XP_002316071.1| predicted protein [Populus trichocarpa] gi|2...   102   2e-20

>ref|XP_002274846.1| PREDICTED: calmodulin-binding transcription activator 1 [Vitis
           vinifera] gi|297736797|emb|CBI25998.3| unnamed protein
           product [Vitis vinifera]
          Length = 1018

 Score =  123 bits (309), Expect = 1e-26
 Identities = 66/145 (45%), Positives = 90/145 (62%)
 Frame = +3

Query: 3   QIRFAKMLCLGMNWKRLDCFVEECDNCHLKDELFSAQKEDEKSGKVYRRLSWLFCKTIKI 182
           QI+ AKML LG   K LDC +EECD C +K +++S +K+D K+      ++  F      
Sbjct: 556 QIQLAKMLHLGQERKWLDCSIEECDKCKIKSDIYS-KKDDIKNDWEELEMAKDFIGNHVN 614

Query: 183 LEMRRLRSC*RTYCMNGLFAMSMDEGKTPHILNDEGQGVIHLVVALGNEWAMGRIIAAGV 362
                +++  +      L     +  + PH+L+ +GQGVIHL  ALG EWAMG II AGV
Sbjct: 615 PRDVLIKNLLKDRLFEWLVCKVHEGVRGPHVLDGKGQGVIHLAAALGYEWAMGPIIVAGV 674

Query: 363 SPNFKDAQGRTALHWPAYYGREETV 437
           SPNF+DA+GRT LHW +Y+GREETV
Sbjct: 675 SPNFRDARGRTGLHWASYFGREETV 699


>gb|AEX07777.1| calmodulin-binding transcription factor SR4 [Solanum lycopersicum]
          Length = 939

 Score =  120 bits (300), Expect = 1e-25
 Identities = 66/149 (44%), Positives = 94/149 (63%), Gaps = 4/149 (2%)
 Frame = +3

Query: 3   QIRFAKMLCLGMNWKRLDCFVEECDNCHLKDELFSAQKEDEKSGKVYRRLSWLF----CK 170
           Q++  K+L  G+N K LDC   EC+NC LK +L S + +   +G    RL  L     C 
Sbjct: 488 QVQLVKLLYSGLNKKFLDCSSRECENCKLKTQLCSLKCQ---TGNATERLEDLLAVIECD 544

Query: 171 TIKILEMRRLRSC*RTYCMNGLFAMSMDEGKTPHILNDEGQGVIHLVVALGNEWAMGRII 350
            I   +++ +++  +      L + + +E K P+ILND+G+GVIHLV ALG EW +  +I
Sbjct: 545 HINFKDVQ-IQNFMKDKLYEWLVSRAHEEDKGPNILNDQGKGVIHLVAALGYEWGLLPLI 603

Query: 351 AAGVSPNFKDAQGRTALHWPAYYGREETV 437
           AAG+SPNF+DA GRTALHW A+YGRE+ V
Sbjct: 604 AAGISPNFRDACGRTALHWAAHYGREDMV 632


>ref|XP_003550574.1| PREDICTED: calmodulin-binding transcription activator 2-like
           [Glycine max]
          Length = 999

 Score =  114 bits (286), Expect = 6e-24
 Identities = 62/145 (42%), Positives = 87/145 (60%)
 Frame = +3

Query: 3   QIRFAKMLCLGMNWKRLDCFVEECDNCHLKDELFSAQKEDEKSGKVYRRLSWLFCKTIKI 182
           Q+R  K++ LG + K L C V EC+ C LK  ++S + +     + ++           I
Sbjct: 558 QMRLLKLVDLGPDNKWLKCSVSECEKCKLKGTMYSVRDDSGVFEETFQIDGIGHINHRDI 617

Query: 183 LEMRRLRSC*RTYCMNGLFAMSMDEGKTPHILNDEGQGVIHLVVALGNEWAMGRIIAAGV 362
           L  R +R   + Y    L     + GK PH+L+DEGQGVIHL  ALG  WAM  ++AAG+
Sbjct: 618 LFQRLVRD--KLY--EWLIYKVHEGGKGPHVLDDEGQGVIHLAAALGYVWAMAPLVAAGI 673

Query: 363 SPNFKDAQGRTALHWPAYYGREETV 437
           SPNF+D++GRT LHW +Y+GREETV
Sbjct: 674 SPNFRDSRGRTGLHWASYFGREETV 698


>ref|XP_002519300.1| calmodulin-binding transcription activator (camta), plants,
           putative [Ricinus communis] gi|223541615|gb|EEF43164.1|
           calmodulin-binding transcription activator (camta),
           plants, putative [Ricinus communis]
          Length = 999

 Score =  107 bits (268), Expect = 8e-22
 Identities = 64/152 (42%), Positives = 87/152 (57%), Gaps = 7/152 (4%)
 Frame = +3

Query: 3   QIRFAKMLCLGMNWKRLDCFVEECDNC-HLKDELFSAQKEDEKSGKVYRR---LSWLFCK 170
           Q+R AK+L LG   K L+C  E C+ C  L+  L+S +    K     R    +S + C 
Sbjct: 547 QVRLAKLLYLGPERKWLNCSSEGCNKCKRLRSTLYSIRNYSNKDYTRIREDCTVSEVNCT 606

Query: 171 TIK---ILEMRRLRSC*RTYCMNGLFAMSMDEGKTPHILNDEGQGVIHLVVALGNEWAMG 341
             +   I  + + + C    C        + EGK   +L+DEGQGV+HL  +LG EWAMG
Sbjct: 607 NSRDELIHSLLKDKLCEWLVC-------KVHEGKGLDVLDDEGQGVMHLAASLGYEWAMG 659

Query: 342 RIIAAGVSPNFKDAQGRTALHWPAYYGREETV 437
            I+A   +PNF+DAQGRTALHW +Y+GREETV
Sbjct: 660 LIVAVSNNPNFRDAQGRTALHWASYFGREETV 691


>ref|XP_002316071.1| predicted protein [Populus trichocarpa] gi|222865111|gb|EEF02242.1|
           predicted protein [Populus trichocarpa]
          Length = 933

 Score =  102 bits (255), Expect = 2e-20
 Identities = 65/154 (42%), Positives = 87/154 (56%), Gaps = 9/154 (5%)
 Frame = +3

Query: 3   QIRFAKMLCLGMNWKRLDCFVEECDNCHLKDELFSAQKEDEKS-GKVYRRLSWLFC---- 167
           Q+R +K+L LG   K  +C +E+C+ C +   LFS + + +   GKV             
Sbjct: 498 QMRLSKLLYLGPGMKSSNCSIEDCERCKIST-LFSLRNDSKGDLGKVQDNCMVAVGDGIG 556

Query: 168 ---KTIKILEMRRLRSC*RTYCMNGLFAMSMDEG-KTPHILNDEGQGVIHLVVALGNEWA 335
              K I+ L M RL             A  + EG K   +L+ EGQGVIHL  +LG EWA
Sbjct: 557 FRDKLIQSLLMDRLCEW---------LACKVHEGDKGSDVLDGEGQGVIHLAASLGYEWA 607

Query: 336 MGRIIAAGVSPNFKDAQGRTALHWPAYYGREETV 437
           M  I+AAG +PNF+DA+GRTALHW +Y+GREETV
Sbjct: 608 MDLIVAAGGNPNFRDARGRTALHWASYFGREETV 641


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