BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037984
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15973.3| unnamed protein product [Vitis vinifera]              218   5e-55
ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containi...   218   5e-55
ref|XP_002314110.1| predicted protein [Populus trichocarpa] gi|2...   202   2e-50
ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containi...   196   2e-48
ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containi...   186   2e-45

>emb|CBI15973.3| unnamed protein product [Vitis vinifera]
          Length = 652

 Score =  218 bits (554), Expect = 5e-55
 Identities = 101/125 (80%), Positives = 114/125 (91%)
 Frame = -3

Query: 440 VHEFLVGDNSHPLCKKVYLKLDEILLNLKSVGYIADKSHLLQDVEEEDVKDQALYLHSEK 261
           VHEFLVGDNSHP  KK+Y KLDEI+  L+++GY+ +KSHLLQ VEEEDVK+QAL+LHSEK
Sbjct: 528 VHEFLVGDNSHPSAKKIYAKLDEIVARLETIGYVPNKSHLLQLVEEEDVKEQALFLHSEK 587

Query: 260 LAIAYGLISTRSPVPIRIVKNLRVCGDCHSVAKLISKLYDREILLRDRYRFHHFKEGNCS 81
           LAIA+GLIST    PIRIVKNLRVCGDCHSVAKL+SKLYDREILLRDRYRFHHF+EG+CS
Sbjct: 588 LAIAFGLISTGQSQPIRIVKNLRVCGDCHSVAKLVSKLYDREILLRDRYRFHHFREGHCS 647

Query: 80  CMDYW 66
           CMDYW
Sbjct: 648 CMDYW 652


>ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 743

 Score =  218 bits (554), Expect = 5e-55
 Identities = 101/125 (80%), Positives = 114/125 (91%)
 Frame = -3

Query: 440 VHEFLVGDNSHPLCKKVYLKLDEILLNLKSVGYIADKSHLLQDVEEEDVKDQALYLHSEK 261
           VHEFLVGDNSHP  KK+Y KLDEI+  L+++GY+ +KSHLLQ VEEEDVK+QAL+LHSEK
Sbjct: 619 VHEFLVGDNSHPSAKKIYAKLDEIVARLETIGYVPNKSHLLQLVEEEDVKEQALFLHSEK 678

Query: 260 LAIAYGLISTRSPVPIRIVKNLRVCGDCHSVAKLISKLYDREILLRDRYRFHHFKEGNCS 81
           LAIA+GLIST    PIRIVKNLRVCGDCHSVAKL+SKLYDREILLRDRYRFHHF+EG+CS
Sbjct: 679 LAIAFGLISTGQSQPIRIVKNLRVCGDCHSVAKLVSKLYDREILLRDRYRFHHFREGHCS 738

Query: 80  CMDYW 66
           CMDYW
Sbjct: 739 CMDYW 743


>ref|XP_002314110.1| predicted protein [Populus trichocarpa] gi|222850518|gb|EEE88065.1|
           predicted protein [Populus trichocarpa]
          Length = 738

 Score =  202 bits (514), Expect = 2e-50
 Identities = 95/125 (76%), Positives = 107/125 (85%)
 Frame = -3

Query: 440 VHEFLVGDNSHPLCKKVYLKLDEILLNLKSVGYIADKSHLLQDVEEEDVKDQALYLHSEK 261
           +HEFLVGDNSHPL  ++Y KLDEI+  +KS GY++D+SHLLQ VEEE +K+ AL LHSEK
Sbjct: 614 IHEFLVGDNSHPLSTEIYSKLDEIVARIKSTGYVSDESHLLQFVEEEYMKEHALNLHSEK 673

Query: 260 LAIAYGLISTRSPVPIRIVKNLRVCGDCHSVAKLISKLYDREILLRDRYRFHHFKEGNCS 81
           LAIAYGLI      PIRIVKNLRVCGDCHSVAKLISKLY+R+ILLRDRYRFHHF  GNCS
Sbjct: 674 LAIAYGLIRMEPSQPIRIVKNLRVCGDCHSVAKLISKLYNRDILLRDRYRFHHFSGGNCS 733

Query: 80  CMDYW 66
           CMDYW
Sbjct: 734 CMDYW 738


>ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
           gi|449470513|ref|XP_004152961.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
           gi|449523079|ref|XP_004168552.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 733

 Score =  196 bits (498), Expect = 2e-48
 Identities = 87/126 (69%), Positives = 109/126 (86%)
 Frame = -3

Query: 443 SVHEFLVGDNSHPLCKKVYLKLDEILLNLKSVGYIADKSHLLQDVEEEDVKDQALYLHSE 264
           +VHEFLVGDN+HPL   +Y KL+EI   LKSVGY  +KSHLLQ +EE+D+K+QAL LHSE
Sbjct: 608 NVHEFLVGDNTHPLSSNIYSKLEEIATKLKSVGYEPNKSHLLQLIEEDDLKEQALSLHSE 667

Query: 263 KLAIAYGLISTRSPVPIRIVKNLRVCGDCHSVAKLISKLYDREILLRDRYRFHHFKEGNC 84
           KLAIA+GL++     PIR+VKNLR+CGDCH+ AKL+S++YDR+ILLRDRYRFHHF++G+C
Sbjct: 668 KLAIAFGLVTLAPSQPIRVVKNLRICGDCHAFAKLVSRVYDRDILLRDRYRFHHFRDGHC 727

Query: 83  SCMDYW 66
           SCMDYW
Sbjct: 728 SCMDYW 733


>ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
            chloroplastic-like [Glycine max]
          Length = 780

 Score =  186 bits (471), Expect = 2e-45
 Identities = 85/125 (68%), Positives = 104/125 (83%)
 Frame = -3

Query: 440  VHEFLVGDNSHPLCKKVYLKLDEILLNLKSVGYIADKSHLLQDVEEEDVKDQALYLHSEK 261
            VHEFLVGDNSHP  +K+Y KLDEI    K +GY  D S+LLQ  EE+++ +Q+L +HSEK
Sbjct: 656  VHEFLVGDNSHPFSQKIYSKLDEISEKFKPIGYKPDMSNLLQLSEEDNLMEQSLNVHSEK 715

Query: 260  LAIAYGLISTRSPVPIRIVKNLRVCGDCHSVAKLISKLYDREILLRDRYRFHHFKEGNCS 81
            LAIA+GLIST S  PIRIVKN+R+CGDCH+ AKL+S+LYDR+ILLRDRYRFHHF+ G CS
Sbjct: 716  LAIAFGLISTASSQPIRIVKNIRICGDCHAFAKLVSQLYDRDILLRDRYRFHHFRGGKCS 775

Query: 80   CMDYW 66
            C+DYW
Sbjct: 776  CLDYW 780