BLASTX nr result

ID: Coptis23_contig00037958 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037958
         (432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38747.2| Polyprotein, putative [Solanum demissum]                76   3e-12
emb|CAN67120.1| hypothetical protein VITISV_017484 [Vitis vinifera]    75   4e-12
emb|CAN70260.1| hypothetical protein VITISV_002223 [Vitis vinifera]    75   4e-12
gb|ABY49842.1| hypothetical protein [Vitis hybrid cultivar]            75   7e-12
emb|CAN84135.1| hypothetical protein VITISV_000113 [Vitis vinifera]    75   7e-12

>gb|AAT38747.2| Polyprotein, putative [Solanum demissum]
          Length = 1402

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 46/128 (35%), Positives = 68/128 (53%), Gaps = 4/128 (3%)
 Frame = +1

Query: 61   TLPPISTIQS----PSVNLPTPTISSLVDAPEPIXXXXXXXXXXXXXXXXXLHDIDLPVA 228
            T PPI  + S     +   P PT+SS    P P+                   ++D+P+A
Sbjct: 830  TKPPIVQVYSRRQVTNDTCPAPTLSS--SDPLPVNPSPT-------------ENLDIPIA 874

Query: 229  FRKGTRHCGRPARYSVTATLCYAGLSPSHQAFISTIDSIIIPRTIGEALSSPGWTQAMKD 408
             RKG R C  P+ YS+   + Y  LSP+  + I+++DSI +P+T+ EAL+ PGW  AM D
Sbjct: 875  LRKGKRQC--PSIYSIANFISYDHLSPTSCSLIASLDSIFVPKTVREALNHPGWYDAMLD 932

Query: 409  EMAALESN 432
            E+ AL+ N
Sbjct: 933  EIHALDDN 940


>emb|CAN67120.1| hypothetical protein VITISV_017484 [Vitis vinifera]
          Length = 1179

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 52/135 (38%), Positives = 69/135 (51%), Gaps = 1/135 (0%)
 Frame = +1

Query: 31  KIVHLLHKMLTLPPISTIQSPSVNLPTPTISSLVDAPEPIXXXXXXXXXXXXXXXXXLHD 210
           ++ H  H ++T PP+S+ + P  + P P IS     P P                  L  
Sbjct: 619 QVYHRRHCVVT-PPLSSAEVPDDSPPIPPIS-----PTPA-----------------LSS 655

Query: 211 ID-LPVAFRKGTRHCGRPARYSVTATLCYAGLSPSHQAFISTIDSIIIPRTIGEALSSPG 387
            D LP+A RKG R    P  + +   L Y  L  S+ AF+ST+ SI +P++  EALS PG
Sbjct: 656 TDHLPIALRKGNRSTRNP--HPIYNFLSYHRLFSSYSAFVSTLSSIYLPKSTSEALSHPG 713

Query: 388 WTQAMKDEMAALESN 432
           W QAM DEMAAL SN
Sbjct: 714 WRQAMVDEMAALHSN 728


>emb|CAN70260.1| hypothetical protein VITISV_002223 [Vitis vinifera]
          Length = 956

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 46/121 (38%), Positives = 61/121 (50%)
 Frame = +1

Query: 70   PISTIQSPSVNLPTPTISSLVDAPEPIXXXXXXXXXXXXXXXXXLHDIDLPVAFRKGTRH 249
            P+   ++P+ +LP P+ S     P P                      DLP+A RKGTR 
Sbjct: 760  PLPFAEAPADSLPIPSASPAPALPSPN---------------------DLPIAVRKGTRS 798

Query: 250  CGRPARYSVTATLCYAGLSPSHQAFISTIDSIIIPRTIGEALSSPGWTQAMKDEMAALES 429
               P  + +   L Y  LS  + AF+S I S+ +P++  EALS PGW QAM DEMAAL S
Sbjct: 799  TSNP--HPIYNFLSYHRLSSPYSAFVSAISSVSLPKSTHEALSHPGWRQAMVDEMAALHS 856

Query: 430  N 432
            N
Sbjct: 857  N 857


>gb|ABY49842.1| hypothetical protein [Vitis hybrid cultivar]
          Length = 1382

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 35/75 (46%), Positives = 50/75 (66%)
 Frame = +1

Query: 208  DIDLPVAFRKGTRHCGRPARYSVTATLCYAGLSPSHQAFISTIDSIIIPRTIGEALSSPG 387
            D+DLP++ RKG RHC   + YS+   + Y  LS S    +++IDSI +P+T+ EAL+ PG
Sbjct: 826  DLDLPISLRKGKRHC--KSIYSIANFVSYDHLSSSSSVLVASIDSISVPKTVTEALNHPG 883

Query: 388  WTQAMKDEMAALESN 432
            W  AM +E+ ALE N
Sbjct: 884  WKNAMLEEICALEDN 898


>emb|CAN84135.1| hypothetical protein VITISV_000113 [Vitis vinifera]
          Length = 1323

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 46/121 (38%), Positives = 61/121 (50%)
 Frame = +1

Query: 70   PISTIQSPSVNLPTPTISSLVDAPEPIXXXXXXXXXXXXXXXXXLHDIDLPVAFRKGTRH 249
            P+   ++P+ +LP P+ S     P P                      DLP+A RKGTR 
Sbjct: 741  PLPFPEAPADSLPIPSASPAPALPSPX---------------------DLPIAVRKGTRS 779

Query: 250  CGRPARYSVTATLCYAGLSPSHQAFISTIDSIIIPRTIGEALSSPGWTQAMKDEMAALES 429
               P  + +   L Y  LS  + AF+S I S+ +P++  EALS PGW QAM DEMAAL S
Sbjct: 780  TRNP--HPIYNFLSYHRLSSPYSAFVSAISSVSLPKSTHEALSHPGWRQAMVDEMAALHS 837

Query: 430  N 432
            N
Sbjct: 838  N 838


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