BLASTX nr result

ID: Coptis23_contig00037956 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037956
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004168994.1| PREDICTED: DUF246 domain-containing protein ...    96   3e-18
emb|CBI16922.3| unnamed protein product [Vitis vinifera]               95   5e-18
ref|XP_002281879.1| PREDICTED: DUF246 domain-containing protein ...    95   5e-18
ref|XP_002331262.1| predicted protein [Populus trichocarpa] gi|2...    93   2e-17
ref|XP_002330934.1| predicted protein [Populus trichocarpa] gi|2...    89   3e-16

>ref|XP_004168994.1| PREDICTED: DUF246 domain-containing protein At1g04910-like, partial
           [Cucumis sativus]
          Length = 638

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 65/141 (46%), Positives = 75/141 (53%), Gaps = 22/141 (15%)
 Frame = -2

Query: 359 MSSKSMVKWVALVGLSLSAVFLFAHFLLFN-TGESIVLHQTSIT---------------- 231
           M  KS +KWV LVG+ LSA  LF HF L   T +SI   Q+SIT                
Sbjct: 7   MVFKSRMKWVGLVGIVLSAFSLFTHFFLARFTQDSISEFQSSITIFSWRPVFEHADFSPT 66

Query: 230 GSLYRRFCSPERL-----PYAEHTGEYEATGLQNNSYIFVRIQERIHEMTNLICDFAVAA 66
             L+RR   P R      P A     Y    LQ+N +IFVRIQ   HE+ N ICD  V A
Sbjct: 67  SPLFRRLWGPVRRLETLHPDANPRQHYPDPSLQSNGFIFVRIQGGFHEIRNSICDVVVIA 126

Query: 65  DLLNAILVIPEITSSTSSKGI 3
            LLNA LV+PEI S+TSSKGI
Sbjct: 127 RLLNATLVVPEIQSTTSSKGI 147


>emb|CBI16922.3| unnamed protein product [Vitis vinifera]
          Length = 669

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 65/141 (46%), Positives = 76/141 (53%), Gaps = 22/141 (15%)
 Frame = -2

Query: 359 MSSKSMVKWVALVGLSLSAVFLFAHFLLFN-TGESIVLHQTSIT---------------- 231
           M  KS +KWV LVGL LSA  +F H LL   T + I  +Q+S+T                
Sbjct: 7   MVFKSKMKWVGLVGLVLSAFSIFIHLLLARYTEDGISDYQSSVTIFSWRPIFENADLPRT 66

Query: 230 GSLYRRFCSPERL-----PYAEHTGEYEATGLQNNSYIFVRIQERIHEMTNLICDFAVAA 66
             L+R+F  P R      P A   G Y A  LQ N YIFVRIQ   HE+ N I D  V +
Sbjct: 67  SPLHRKFWGPVRRFEPLNPDANPRGYYAAPPLQTNGYIFVRIQGGFHEIRNSISDVVVVS 126

Query: 65  DLLNAILVIPEITSSTSSKGI 3
            LLNA LVIPEI S+TSSKGI
Sbjct: 127 RLLNATLVIPEIQSTTSSKGI 147


>ref|XP_002281879.1| PREDICTED: DUF246 domain-containing protein At1g04910 [Vitis
           vinifera]
          Length = 681

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 65/141 (46%), Positives = 76/141 (53%), Gaps = 22/141 (15%)
 Frame = -2

Query: 359 MSSKSMVKWVALVGLSLSAVFLFAHFLLFN-TGESIVLHQTSIT---------------- 231
           M  KS +KWV LVGL LSA  +F H LL   T + I  +Q+S+T                
Sbjct: 7   MVFKSKMKWVGLVGLVLSAFSIFIHLLLARYTEDGISDYQSSVTIFSWRPIFENADLPRT 66

Query: 230 GSLYRRFCSPERL-----PYAEHTGEYEATGLQNNSYIFVRIQERIHEMTNLICDFAVAA 66
             L+R+F  P R      P A   G Y A  LQ N YIFVRIQ   HE+ N I D  V +
Sbjct: 67  SPLHRKFWGPVRRFEPLNPDANPRGYYAAPPLQTNGYIFVRIQGGFHEIRNSISDVVVVS 126

Query: 65  DLLNAILVIPEITSSTSSKGI 3
            LLNA LVIPEI S+TSSKGI
Sbjct: 127 RLLNATLVIPEIQSTTSSKGI 147


>ref|XP_002331262.1| predicted protein [Populus trichocarpa] gi|222873687|gb|EEF10818.1|
           predicted protein [Populus trichocarpa]
          Length = 679

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 63/141 (44%), Positives = 74/141 (52%), Gaps = 22/141 (15%)
 Frame = -2

Query: 359 MSSKSMVKWVALVGLSLSAVFLFAHFLLFN-TGESIVLHQTSIT---------------- 231
           M  KS +KWV LVGL LSA  LF HFLL   T E I  +Q+S+T                
Sbjct: 7   MMIKSKMKWVGLVGLVLSAFSLFVHFLLARFTEEGITDYQSSVTIFSWRPVFENPDFAKN 66

Query: 230 GSLYRRFCSPERL-----PYAEHTGEYEATGLQNNSYIFVRIQERIHEMTNLICDFAVAA 66
              YRR   P R      P A   G Y     +++ Y+FVRIQ   HE+ N ICD  V +
Sbjct: 67  SPSYRRLWGPVRRLESLHPDANPRGYYTDPRSESSGYVFVRIQGGFHEIRNSICDVVVIS 126

Query: 65  DLLNAILVIPEITSSTSSKGI 3
            LLNA LVIPEI S+T SKGI
Sbjct: 127 RLLNATLVIPEIQSTTRSKGI 147


>ref|XP_002330934.1| predicted protein [Populus trichocarpa] gi|222873128|gb|EEF10259.1|
           predicted protein [Populus trichocarpa]
          Length = 667

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 61/137 (44%), Positives = 72/137 (52%), Gaps = 22/137 (16%)
 Frame = -2

Query: 347 SMVKWVALVGLSLSAVFLFAHFLLFN-TGESIVLHQTSIT----------------GSLY 219
           S +KWV LVGL LSA  LF HFLL   T E I  +Q+S+T                  LY
Sbjct: 11  SKMKWVGLVGLVLSAFSLFVHFLLARYTEEGISDYQSSVTIFSWRPIFENSDFAKNSPLY 70

Query: 218 RRFCSPERL-----PYAEHTGEYEATGLQNNSYIFVRIQERIHEMTNLICDFAVAADLLN 54
           RR     R      P A   G Y     +++ Y+FVRIQ   HE+ N ICD    + LLN
Sbjct: 71  RRLWGQVRRLESLHPDANPRGYYADPRSESSGYVFVRIQGGFHEIRNSICDVVAISRLLN 130

Query: 53  AILVIPEITSSTSSKGI 3
           A LVIPEI S+TSSKGI
Sbjct: 131 ATLVIPEIQSTTSSKGI 147


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