BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037941
         (623 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332333.1| predicted protein [Populus trichocarpa] gi|2...   247   1e-63
ref|XP_002511032.1| ATP-dependent DNA helicase pcrA, putative [R...   242   3e-62
ref|XP_003555493.1| PREDICTED: ATP-dependent DNA helicase pcrA-l...   234   9e-60
ref|XP_002277737.2| PREDICTED: ATP-dependent DNA helicase pcrA-l...   231   6e-59
ref|XP_003590708.1| ATP-dependent DNA helicase pcrA [Medicago tr...   228   5e-58

>ref|XP_002332333.1| predicted protein [Populus trichocarpa] gi|222832580|gb|EEE71057.1|
            predicted protein [Populus trichocarpa]
          Length = 1056

 Score =  247 bits (630), Expect = 1e-63
 Identities = 117/208 (56%), Positives = 163/208 (78%), Gaps = 2/208 (0%)
 Frame = -3

Query: 621  YILYVIVDSSWQLLQPSRFLKEIPIHLREVQTELTSVELQGMHEDLSKVNVKVFDVDPRP 442
            +I YV +DS+WQ+L PSRFLKEIP HLRE+Q E+   +LQ  H ++    +      P+ 
Sbjct: 818  FITYVAMDSNWQMLHPSRFLKEIPDHLREIQAEVCLQDLQTKHREIGNETIDFVIDLPKE 877

Query: 441  EELADVQADAPN--LQCIGIVSSESVDLVEACGGDAFLKRFSVEDRAMISHLFHQWAKKK 268
            ++++D++ ++ +  +  I   S ES++ +++  G+ FL+RF+VE+R++ISHLFHQWAKK+
Sbjct: 878  QKVSDLETESNDFLVNQINEASKESLETIDSYNGNIFLRRFAVEERSVISHLFHQWAKKQ 937

Query: 267  AFEEPKRLLDKIGFVIDERLRIKTNKNKDVLRALKSCLSCAEAFQYAQTVLRWEKLPAEK 88
            AF+ PKRLL+K+GFVIDERLR++ NK+KDVLRALKSCLSC EAFQYA+ VLRWE++PA++
Sbjct: 938  AFQNPKRLLNKVGFVIDERLRVEKNKHKDVLRALKSCLSCDEAFQYAEYVLRWEQIPADQ 997

Query: 87   RAHLTREKQEHFQRLRIENAMGSSVATS 4
            RAHL  EKQEHFQ+LRIEN+M SS  TS
Sbjct: 998  RAHLIHEKQEHFQKLRIENSMSSSAPTS 1025


>ref|XP_002511032.1| ATP-dependent DNA helicase pcrA, putative [Ricinus communis]
            gi|223550147|gb|EEF51634.1| ATP-dependent DNA helicase
            pcrA, putative [Ricinus communis]
          Length = 1089

 Score =  242 bits (618), Expect = 3e-62
 Identities = 121/207 (58%), Positives = 159/207 (76%), Gaps = 2/207 (0%)
 Frame = -3

Query: 621  YILYVIVDSSWQLLQPSRFLKEIPIHLREVQTELTSVELQGMHEDLSKVNVKVFDVDPRP 442
            +ILY  +DS+WQ+LQPSRFLKEIP HLRE+Q E+   +LQ   +D+SK  V      P  
Sbjct: 851  FILYYTLDSNWQMLQPSRFLKEIPDHLREIQAEVCLRDLQTEPQDISKGTVNSTTSLPGE 910

Query: 441  EELADVQADAPNLQCIGIVSS--ESVDLVEACGGDAFLKRFSVEDRAMISHLFHQWAKKK 268
            ++ ++V  D  +   I   +   ES D V+ C G++FLKRF+V DR+++SHLFHQWAKK+
Sbjct: 911  KQPSEVHRDPIDFLEIQNNNDLKESKDPVDVCNGNSFLKRFAVVDRSVVSHLFHQWAKKQ 970

Query: 267  AFEEPKRLLDKIGFVIDERLRIKTNKNKDVLRALKSCLSCAEAFQYAQTVLRWEKLPAEK 88
            AF+ PKRLLDK+GFVIDERLRIK NK+KDVLRALK+CLSC EAFQYA+  LRWE++PA++
Sbjct: 971  AFQNPKRLLDKVGFVIDERLRIKKNKHKDVLRALKACLSCDEAFQYAEYALRWEQIPADE 1030

Query: 87   RAHLTREKQEHFQRLRIENAMGSSVAT 7
            RAH+ REKQE+FQ++RIEN+M +S  T
Sbjct: 1031 RAHMMREKQEYFQKVRIENSMSTSAPT 1057


>ref|XP_003555493.1| PREDICTED: ATP-dependent DNA helicase pcrA-like [Glycine max]
          Length = 1123

 Score =  234 bits (597), Expect = 9e-60
 Identities = 124/217 (57%), Positives = 151/217 (69%), Gaps = 12/217 (5%)
 Frame = -3

Query: 621  YILYVIVDSSWQLLQPSRFLKEIPIHLREVQTELTSVELQGMHEDLSKVNVKVF------ 460
            +IL+V++DS+WQ+LQPSRFLKEIP HL EVQ E++  EL    E L K            
Sbjct: 883  FILHVMMDSNWQMLQPSRFLKEIPRHLTEVQGEISFQELLIKQEALQKETAHCTTDLLIK 942

Query: 459  ------DVDPRPEELADVQADAPNLQCIGIVSSESVDLVEACGGDAFLKRFSVEDRAMIS 298
                  DV P P E+ D  +           S+E     EA   + FL+RFSVE+R+++S
Sbjct: 943  EKQSEADVIPMPHEILDNHSSE--------TSNELAQFAEANNRNDFLRRFSVENRSIVS 994

Query: 297  HLFHQWAKKKAFEEPKRLLDKIGFVIDERLRIKTNKNKDVLRALKSCLSCAEAFQYAQTV 118
            HLFHQWAKKKAF++PKRLLDK+ FVIDERLR K NKNKD+L  LKSCLSC EAFQYAQ V
Sbjct: 995  HLFHQWAKKKAFQDPKRLLDKVSFVIDERLRQKRNKNKDLLNTLKSCLSCDEAFQYAQYV 1054

Query: 117  LRWEKLPAEKRAHLTREKQEHFQRLRIENAMGSSVAT 7
            LRWE++PA+KRAHL REKQEHF +L+IENAMGS+  T
Sbjct: 1055 LRWEQIPADKRAHLMREKQEHFLKLKIENAMGSATPT 1091


>ref|XP_002277737.2| PREDICTED: ATP-dependent DNA helicase pcrA-like [Vitis vinifera]
          Length = 1113

 Score =  231 bits (590), Expect = 6e-59
 Identities = 118/211 (55%), Positives = 156/211 (73%), Gaps = 5/211 (2%)
 Frame = -3

Query: 621  YILYVIVDSSWQLLQPSRFLKEIPIHLREVQTELTSVELQGMH--EDLSKVNVKVFDVDP 448
            +ILYV++DSSWQ+LQPSRFLKEIP HL EVQ EL+   +QG+H  ++ + +    F +  
Sbjct: 875  FILYVLMDSSWQMLQPSRFLKEIPHHLLEVQGELS---VQGLHAKQESTPIENAQFTIGE 931

Query: 447  RPEELADVQADAPNLQC---IGIVSSESVDLVEACGGDAFLKRFSVEDRAMISHLFHQWA 277
              ++ +  +   PN      I   S E+ + + +C G++FL+RF+VEDR+++SHLFH WA
Sbjct: 932  GGDKKSSREYILPNEGLNIQIDECSKETTEPMGSCDGNSFLRRFNVEDRSVVSHLFHHWA 991

Query: 276  KKKAFEEPKRLLDKIGFVIDERLRIKTNKNKDVLRALKSCLSCAEAFQYAQTVLRWEKLP 97
            KK+AF+EPKRLLDK+GF IDERLR+  NK+KD LR LKS L C EAF YA+ +L+WEK+P
Sbjct: 992  KKQAFQEPKRLLDKVGFAIDERLRVTKNKHKDALRELKSSLKCDEAFHYAEYILKWEKIP 1051

Query: 96   AEKRAHLTREKQEHFQRLRIENAMGSSVATS 4
            A+KRAHL R KQEHF +LRIENAMGSS  TS
Sbjct: 1052 ADKRAHLMRMKQEHFLKLRIENAMGSSAPTS 1082


>ref|XP_003590708.1| ATP-dependent DNA helicase pcrA [Medicago truncatula]
           gi|355479756|gb|AES60959.1| ATP-dependent DNA helicase
           pcrA [Medicago truncatula]
          Length = 339

 Score =  228 bits (582), Expect = 5e-58
 Identities = 120/217 (55%), Positives = 150/217 (69%), Gaps = 12/217 (5%)
 Frame = -3

Query: 621 YILYVIVDSSWQLLQPSRFLKEIPIHLREVQTELTSVELQGMHED------------LSK 478
           ++LYV+VDS+WQ+LQPSRFLKEIP HL E Q ++   ELQ   E             L K
Sbjct: 99  FMLYVMVDSNWQMLQPSRFLKEIPHHLLEFQGDINMQELQIKREGHQKETTCCTTDLLIK 158

Query: 477 VNVKVFDVDPRPEELADVQADAPNLQCIGIVSSESVDLVEACGGDAFLKRFSVEDRAMIS 298
                 D+DP P  L +              SSE  +  EA  G+ F++RF VEDR+++S
Sbjct: 159 KQQSEADLDPVPNNLLNNHFSE--------ASSELAEFAEANNGNDFIRRFDVEDRSVVS 210

Query: 297 HLFHQWAKKKAFEEPKRLLDKIGFVIDERLRIKTNKNKDVLRALKSCLSCAEAFQYAQTV 118
           H+FH+WAKKKAF++PKRLLDK+GFVIDERLR K NK+KD+L +LKS LSC EA QYAQ V
Sbjct: 211 HIFHKWAKKKAFQDPKRLLDKVGFVIDERLRQKKNKHKDLLNSLKSSLSCDEAMQYAQYV 270

Query: 117 LRWEKLPAEKRAHLTREKQEHFQRLRIENAMGSSVAT 7
           LRWE++PA+KRAHL REKQEHF +L+IENAMGS+  T
Sbjct: 271 LRWEQIPADKRAHLMREKQEHFLKLKIENAMGSATPT 307