BLASTX nr result
ID: Coptis23_contig00037919
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00037919 (294 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002522353.1| conserved hypothetical protein [Ricinus comm... 82 5e-14 ref|NP_190612.3| uncharacterized protein [Arabidopsis thaliana] ... 56 3e-06 ref|XP_003519917.1| PREDICTED: uncharacterized protein LOC100812... 56 3e-06 emb|CAB62472.1| hypothetical protein [Arabidopsis thaliana] 56 3e-06 >ref|XP_002522353.1| conserved hypothetical protein [Ricinus communis] gi|223538431|gb|EEF40037.1| conserved hypothetical protein [Ricinus communis] Length = 535 Score = 82.0 bits (201), Expect = 5e-14 Identities = 38/92 (41%), Positives = 51/92 (55%) Frame = +3 Query: 3 LISFDKGAGTKCSCASSNSCLTSKFQYGQDCCAWNKGLSQLSEWINRHVPLDKMVDYEMY 182 LIS + KC+C + N C DCC KG ++ +W+ H P+D V EMY Sbjct: 397 LISLTRDKSKKCTCGTLNCCSGYSIS-DMDCCGRKKGFLEIYKWLQGHFPIDMSVGQEMY 455 Query: 183 IKSCASFTLSLLKLYMDEDDFLFEILLHLSSL 278 + C FT S L+LYM EDD LF++LL L S+ Sbjct: 456 FEKCIGFTFSFLQLYMHEDDVLFKVLLQLLSI 487 >ref|NP_190612.3| uncharacterized protein [Arabidopsis thaliana] gi|28973649|gb|AAO64145.1| unknown protein [Arabidopsis thaliana] gi|110737253|dbj|BAF00574.1| hypothetical protein [Arabidopsis thaliana] gi|332645145|gb|AEE78666.1| uncharacterized protein [Arabidopsis thaliana] Length = 642 Score = 56.2 bits (134), Expect = 3e-06 Identities = 23/58 (39%), Positives = 39/58 (67%) Frame = +3 Query: 108 KGLSQLSEWINRHVPLDKMVDYEMYIKSCASFTLSLLKLYMDEDDFLFEILLHLSSLP 281 KG++++ +WI R +P + D+ +Y K F+ S ++L+M EDD LF++LL L S+P Sbjct: 423 KGMAEMFKWIERQIPGNMFSDHRIYSKKNVEFSASFVRLFMHEDDLLFKVLLQLLSVP 480 >ref|XP_003519917.1| PREDICTED: uncharacterized protein LOC100812484 [Glycine max] Length = 639 Score = 56.2 bits (134), Expect = 3e-06 Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 5/84 (5%) Frame = +3 Query: 51 SNSCLTSKFQYGQDC-----CAWNKGLSQLSEWINRHVPLDKMVDYEMYIKSCASFTLSL 215 +NS L S F D C KG +L +WI H+P +++E Y++ C +F S Sbjct: 418 NNSTLCSSFTTNPDSEHDYFCR-KKGSLELFKWILGHLPTAISINHEKYMQMCMNFISSF 476 Query: 216 LKLYMDEDDFLFEILLHLSSLPFS 287 L+LY+ EDD LFE+LL L S+ S Sbjct: 477 LQLYLREDDLLFEVLLLLFSISSS 500 >emb|CAB62472.1| hypothetical protein [Arabidopsis thaliana] Length = 730 Score = 56.2 bits (134), Expect = 3e-06 Identities = 23/58 (39%), Positives = 39/58 (67%) Frame = +3 Query: 108 KGLSQLSEWINRHVPLDKMVDYEMYIKSCASFTLSLLKLYMDEDDFLFEILLHLSSLP 281 KG++++ +WI R +P + D+ +Y K F+ S ++L+M EDD LF++LL L S+P Sbjct: 416 KGMAEMFKWIERQIPGNMFSDHRIYSKKNVEFSASFVRLFMHEDDLLFKVLLQLLSVP 473