BLASTX nr result

ID: Coptis23_contig00037902 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037902
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318301.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
gb|ABK94145.1| unknown [Populus trichocarpa]                           97   1e-18
emb|CBI39004.3| unnamed protein product [Vitis vinifera]               96   2e-18
ref|XP_002276337.1| PREDICTED: patatin group A-3 [Vitis vinifera]      96   2e-18
ref|XP_002322380.1| predicted protein [Populus trichocarpa] gi|2...    96   3e-18

>ref|XP_002318301.1| predicted protein [Populus trichocarpa] gi|222858974|gb|EEE96521.1|
           predicted protein [Populus trichocarpa]
          Length = 438

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 55/80 (68%), Positives = 64/80 (80%), Gaps = 3/80 (3%)
 Frame = -2

Query: 322 SNLSAIAEAMLAQKNVESVLFRGKKVVEKTNSDKLDWFAGELIKEHERRKFSILPVVVFK 143
           ++L A+   MLAQKNVESVLF GKK+VE TN DKL+ F GELIKE ERRK SILP VV K
Sbjct: 359 ADLLAMTAEMLAQKNVESVLFEGKKIVESTNFDKLETFTGELIKEQERRKTSILPTVVLK 418

Query: 142 QS--SPRTSSA-TVSTISSH 92
           Q+  SPRTSSA T+ST+SS+
Sbjct: 419 QNSPSPRTSSATTLSTLSSY 438


>gb|ABK94145.1| unknown [Populus trichocarpa]
          Length = 222

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 55/80 (68%), Positives = 64/80 (80%), Gaps = 3/80 (3%)
 Frame = -2

Query: 322 SNLSAIAEAMLAQKNVESVLFRGKKVVEKTNSDKLDWFAGELIKEHERRKFSILPVVVFK 143
           ++L A+   MLAQKNVESVLF GKK+VE TN DKL+ F GELIKE ERRK SILP VV K
Sbjct: 143 ADLLAMTAEMLAQKNVESVLFEGKKIVESTNFDKLETFTGELIKEQERRKTSILPTVVLK 202

Query: 142 QS--SPRTSSA-TVSTISSH 92
           Q+  SPRTSSA T+ST+SS+
Sbjct: 203 QNSPSPRTSSATTLSTLSSY 222


>emb|CBI39004.3| unnamed protein product [Vitis vinifera]
          Length = 417

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 53/81 (65%), Positives = 64/81 (79%), Gaps = 3/81 (3%)
 Frame = -2

Query: 325 NSNLSAIAEAMLAQKNVESVLFRGKKVVEKTNSDKLDWFAGELIKEHERRKFSILPVVVF 146
           +  L  + E ML QKNVESVLF GKK+VEKTNS+KL WFA E++KE ERRK SILP VV 
Sbjct: 337 SKQLVGMTEEMLEQKNVESVLFSGKKLVEKTNSEKLQWFAAEIMKEKERRKTSILPTVVL 396

Query: 145 KQS--SPRTSSA-TVSTISSH 92
           KQ+  SPRTSSA T+S++SS+
Sbjct: 397 KQASHSPRTSSATTLSSMSSN 417


>ref|XP_002276337.1| PREDICTED: patatin group A-3 [Vitis vinifera]
          Length = 427

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 53/81 (65%), Positives = 64/81 (79%), Gaps = 3/81 (3%)
 Frame = -2

Query: 325 NSNLSAIAEAMLAQKNVESVLFRGKKVVEKTNSDKLDWFAGELIKEHERRKFSILPVVVF 146
           +  L  + E ML QKNVESVLF GKK+VEKTNS+KL WFA E++KE ERRK SILP VV 
Sbjct: 347 SKQLVGMTEEMLEQKNVESVLFSGKKLVEKTNSEKLQWFAAEIMKEKERRKTSILPTVVL 406

Query: 145 KQS--SPRTSSA-TVSTISSH 92
           KQ+  SPRTSSA T+S++SS+
Sbjct: 407 KQASHSPRTSSATTLSSMSSN 427


>ref|XP_002322380.1| predicted protein [Populus trichocarpa] gi|222869376|gb|EEF06507.1|
           predicted protein [Populus trichocarpa]
          Length = 438

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 55/80 (68%), Positives = 64/80 (80%), Gaps = 3/80 (3%)
 Frame = -2

Query: 322 SNLSAIAEAMLAQKNVESVLFRGKKVVEKTNSDKLDWFAGELIKEHERRKFSILPVVVFK 143
           ++L A+   MLAQKNVESVLF GKK+VE TN DKL+ F+GELIKE ERRK SILP VV K
Sbjct: 359 ADLLAMTAEMLAQKNVESVLFEGKKIVESTNHDKLETFSGELIKEQERRKTSILPPVVLK 418

Query: 142 QS--SPRTSSAT-VSTISSH 92
           Q+  SPRTSSAT +ST SS+
Sbjct: 419 QNSPSPRTSSATSLSTSSSY 438


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