BLASTX nr result
ID: Coptis23_contig00037874
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00037874 (274 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAH67874.1| OSIGBa0153E02-OSIGBa0093I20.3 [Oryza sativa Indi... 108 6e-22 emb|CAE05707.2| OSJNBb0065J09.3 [Oryza sativa Japonica Group] 108 6e-22 emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera] 107 8e-22 emb|CAN64613.1| hypothetical protein VITISV_030850 [Vitis vinifera] 107 1e-21 gb|AAM91874.1| putative copia-like polyprotein [Oryza sativa Jap... 106 2e-21 >emb|CAH67874.1| OSIGBa0153E02-OSIGBa0093I20.3 [Oryza sativa Indica Group] Length = 806 Score = 108 bits (269), Expect = 6e-22 Identities = 55/90 (61%), Positives = 68/90 (75%) Frame = +3 Query: 3 HRLHADVGDPLPDPGVYQRLVGRLIYLTNTRPDIAFAVSVASQFMHAPRSTHMDAVDRIL 182 H+L A++GDP+ + YQRLVGRLIYL +TRPDI +AVSV S++MH PRS HMDAV RIL Sbjct: 569 HKLCAELGDPV-NKERYQRLVGRLIYLCHTRPDITYAVSVVSRYMHDPRSGHMDAVYRIL 627 Query: 183 RYLKSSPGLGLFYPATGSSDLVSYSDADYA 272 RYLK SPG GL++ G + Y DAD+A Sbjct: 628 RYLKGSPGKGLWFKKNGHLGVEGYCDADWA 657 >emb|CAE05707.2| OSJNBb0065J09.3 [Oryza sativa Japonica Group] Length = 1015 Score = 108 bits (269), Expect = 6e-22 Identities = 55/90 (61%), Positives = 68/90 (75%) Frame = +3 Query: 3 HRLHADVGDPLPDPGVYQRLVGRLIYLTNTRPDIAFAVSVASQFMHAPRSTHMDAVDRIL 182 H+L A++GDP+ + YQRLVGRLIYL +TRPDI +AVSV S++MH PRS HMDAV RIL Sbjct: 760 HKLCAELGDPV-NKERYQRLVGRLIYLCHTRPDITYAVSVVSRYMHDPRSGHMDAVYRIL 818 Query: 183 RYLKSSPGLGLFYPATGSSDLVSYSDADYA 272 RYLK SPG GL++ G + Y DAD+A Sbjct: 819 RYLKGSPGKGLWFKKNGHLGVEGYCDADWA 848 >emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera] Length = 1279 Score = 107 bits (268), Expect = 8e-22 Identities = 51/86 (59%), Positives = 66/86 (76%) Frame = +3 Query: 15 ADVGDPLPDPGVYQRLVGRLIYLTNTRPDIAFAVSVASQFMHAPRSTHMDAVDRILRYLK 194 +D G+ L DP Y+RLVGRLIYLT TRPDI ++V V S+FMHAPR HM+A R+LRYLK Sbjct: 1045 SDSGELLKDPSQYRRLVGRLIYLTITRPDITYSVHVLSRFMHAPRRPHMEAALRVLRYLK 1104 Query: 195 SSPGLGLFYPATGSSDLVSYSDADYA 272 +SPG GLF+P+ L ++SD+D+A Sbjct: 1105 NSPGQGLFFPSQNDLSLRAFSDSDWA 1130 >emb|CAN64613.1| hypothetical protein VITISV_030850 [Vitis vinifera] Length = 598 Score = 107 bits (266), Expect = 1e-21 Identities = 55/90 (61%), Positives = 64/90 (71%) Frame = +3 Query: 3 HRLHADVGDPLPDPGVYQRLVGRLIYLTNTRPDIAFAVSVASQFMHAPRSTHMDAVDRIL 182 H+L V D YQRLVG+LIYL++TRPDIA+AVSV SQFMH P HMDAV RIL Sbjct: 395 HKLGEYVDQVPADKQRYQRLVGKLIYLSHTRPDIAYAVSVVSQFMHRPSEDHMDAVMRIL 454 Query: 183 RYLKSSPGLGLFYPATGSSDLVSYSDADYA 272 RYLKSSPG GL + G +V Y+DAD+A Sbjct: 455 RYLKSSPGKGLMFSKNGHLKVVGYTDADWA 484 >gb|AAM91874.1| putative copia-like polyprotein [Oryza sativa Japonica Group] Length = 894 Score = 106 bits (265), Expect = 2e-21 Identities = 53/89 (59%), Positives = 67/89 (75%) Frame = +3 Query: 3 HRLHADVGDPLPDPGVYQRLVGRLIYLTNTRPDIAFAVSVASQFMHAPRSTHMDAVDRIL 182 H+L A+ GDP+ + YQRLVGRLIYL +TRPDI +AVSV S++MH PRS HMD V RIL Sbjct: 657 HKLCAESGDPV-NKERYQRLVGRLIYLCHTRPDITYAVSVVSRYMHDPRSGHMDVVYRIL 715 Query: 183 RYLKSSPGLGLFYPATGSSDLVSYSDADY 269 RYLK+SPG G+++ G D+ Y DAD+ Sbjct: 716 RYLKASPGKGIWFKKNGHLDMEGYCDADW 744