BLASTX nr result

ID: Coptis23_contig00037874 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037874
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAH67874.1| OSIGBa0153E02-OSIGBa0093I20.3 [Oryza sativa Indi...   108   6e-22
emb|CAE05707.2| OSJNBb0065J09.3 [Oryza sativa Japonica Group]         108   6e-22
emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera]   107   8e-22
emb|CAN64613.1| hypothetical protein VITISV_030850 [Vitis vinifera]   107   1e-21
gb|AAM91874.1| putative copia-like polyprotein [Oryza sativa Jap...   106   2e-21

>emb|CAH67874.1| OSIGBa0153E02-OSIGBa0093I20.3 [Oryza sativa Indica Group]
          Length = 806

 Score =  108 bits (269), Expect = 6e-22
 Identities = 55/90 (61%), Positives = 68/90 (75%)
 Frame = +3

Query: 3   HRLHADVGDPLPDPGVYQRLVGRLIYLTNTRPDIAFAVSVASQFMHAPRSTHMDAVDRIL 182
           H+L A++GDP+ +   YQRLVGRLIYL +TRPDI +AVSV S++MH PRS HMDAV RIL
Sbjct: 569 HKLCAELGDPV-NKERYQRLVGRLIYLCHTRPDITYAVSVVSRYMHDPRSGHMDAVYRIL 627

Query: 183 RYLKSSPGLGLFYPATGSSDLVSYSDADYA 272
           RYLK SPG GL++   G   +  Y DAD+A
Sbjct: 628 RYLKGSPGKGLWFKKNGHLGVEGYCDADWA 657


>emb|CAE05707.2| OSJNBb0065J09.3 [Oryza sativa Japonica Group]
          Length = 1015

 Score =  108 bits (269), Expect = 6e-22
 Identities = 55/90 (61%), Positives = 68/90 (75%)
 Frame = +3

Query: 3    HRLHADVGDPLPDPGVYQRLVGRLIYLTNTRPDIAFAVSVASQFMHAPRSTHMDAVDRIL 182
            H+L A++GDP+ +   YQRLVGRLIYL +TRPDI +AVSV S++MH PRS HMDAV RIL
Sbjct: 760  HKLCAELGDPV-NKERYQRLVGRLIYLCHTRPDITYAVSVVSRYMHDPRSGHMDAVYRIL 818

Query: 183  RYLKSSPGLGLFYPATGSSDLVSYSDADYA 272
            RYLK SPG GL++   G   +  Y DAD+A
Sbjct: 819  RYLKGSPGKGLWFKKNGHLGVEGYCDADWA 848


>emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera]
          Length = 1279

 Score =  107 bits (268), Expect = 8e-22
 Identities = 51/86 (59%), Positives = 66/86 (76%)
 Frame = +3

Query: 15   ADVGDPLPDPGVYQRLVGRLIYLTNTRPDIAFAVSVASQFMHAPRSTHMDAVDRILRYLK 194
            +D G+ L DP  Y+RLVGRLIYLT TRPDI ++V V S+FMHAPR  HM+A  R+LRYLK
Sbjct: 1045 SDSGELLKDPSQYRRLVGRLIYLTITRPDITYSVHVLSRFMHAPRRPHMEAALRVLRYLK 1104

Query: 195  SSPGLGLFYPATGSSDLVSYSDADYA 272
            +SPG GLF+P+     L ++SD+D+A
Sbjct: 1105 NSPGQGLFFPSQNDLSLRAFSDSDWA 1130


>emb|CAN64613.1| hypothetical protein VITISV_030850 [Vitis vinifera]
          Length = 598

 Score =  107 bits (266), Expect = 1e-21
 Identities = 55/90 (61%), Positives = 64/90 (71%)
 Frame = +3

Query: 3   HRLHADVGDPLPDPGVYQRLVGRLIYLTNTRPDIAFAVSVASQFMHAPRSTHMDAVDRIL 182
           H+L   V     D   YQRLVG+LIYL++TRPDIA+AVSV SQFMH P   HMDAV RIL
Sbjct: 395 HKLGEYVDQVPADKQRYQRLVGKLIYLSHTRPDIAYAVSVVSQFMHRPSEDHMDAVMRIL 454

Query: 183 RYLKSSPGLGLFYPATGSSDLVSYSDADYA 272
           RYLKSSPG GL +   G   +V Y+DAD+A
Sbjct: 455 RYLKSSPGKGLMFSKNGHLKVVGYTDADWA 484


>gb|AAM91874.1| putative copia-like polyprotein [Oryza sativa Japonica Group]
          Length = 894

 Score =  106 bits (265), Expect = 2e-21
 Identities = 53/89 (59%), Positives = 67/89 (75%)
 Frame = +3

Query: 3   HRLHADVGDPLPDPGVYQRLVGRLIYLTNTRPDIAFAVSVASQFMHAPRSTHMDAVDRIL 182
           H+L A+ GDP+ +   YQRLVGRLIYL +TRPDI +AVSV S++MH PRS HMD V RIL
Sbjct: 657 HKLCAESGDPV-NKERYQRLVGRLIYLCHTRPDITYAVSVVSRYMHDPRSGHMDVVYRIL 715

Query: 183 RYLKSSPGLGLFYPATGSSDLVSYSDADY 269
           RYLK+SPG G+++   G  D+  Y DAD+
Sbjct: 716 RYLKASPGKGIWFKKNGHLDMEGYCDADW 744


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