BLASTX nr result

ID: Coptis23_contig00037872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037872
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002445372.1| hypothetical protein SORBIDRAFT_07g013775 [S...    82   6e-14
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    79   4e-13
ref|XP_002452061.1| hypothetical protein SORBIDRAFT_04g017843 [S...    78   6e-13
ref|XP_002447968.1| hypothetical protein SORBIDRAFT_06g019043 [S...    77   2e-12
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...    76   2e-12

>ref|XP_002445372.1| hypothetical protein SORBIDRAFT_07g013775 [Sorghum bicolor]
           gi|241941722|gb|EES14867.1| hypothetical protein
           SORBIDRAFT_07g013775 [Sorghum bicolor]
          Length = 589

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 46/95 (48%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
 Frame = +1

Query: 1   LILGDFNAVVCSTEKEGGNPIPPRHLDDFVSLINDFDITDLGFSGASFTWSNHR-MGETN 177
           L  GDFN V+   EKEGG P P   +D F   +   ++ DLGF G  FTW N +  GE++
Sbjct: 381 LCAGDFNEVLYQHEKEGGVPRPQNSMDRFKQALEVSELHDLGFEGNVFTWRNKQSKGESH 440

Query: 178 IRERLDRAIANVE*LDIFPMACVSHIATSSSDHVA 282
           IRERLDRA+AN E L  FP+  V +  T  SDH A
Sbjct: 441 IRERLDRAVANFEWLAKFPLVRVKNGDTYHSDHRA 475


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 40/90 (44%), Positives = 56/90 (62%)
 Frame = +1

Query: 10  GDFNAVVCSTEKEGGNPIPPRHLDDFVSLINDFDITDLGFSGASFTWSNHRMGETNIRER 189
           GDFN ++ ++EK+GG+    R  D F + + +    DLGF G  FTW+N+R G+ NI+ER
Sbjct: 141 GDFNLMLVASEKKGGDGFNSREADIFRNAMEECHFMDLGFVGYEFTWTNNRGGDANIQER 200

Query: 190 LDRAIANVE*LDIFPMACVSHIATSSSDHV 279
           LDR +AN      FP + VSH+    SDHV
Sbjct: 201 LDRFVANDLWKIKFPGSFVSHLPKRKSDHV 230


>ref|XP_002452061.1| hypothetical protein SORBIDRAFT_04g017843 [Sorghum bicolor]
           gi|241931892|gb|EES05037.1| hypothetical protein
           SORBIDRAFT_04g017843 [Sorghum bicolor]
          Length = 503

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 44/93 (47%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
 Frame = +1

Query: 1   LILGDFNAVVCSTEKEGGNPIPPRHLDDFVSLINDFDITDLGFSGASFTWSN-HRMGETN 177
           L  GDFN ++   EKEGG P     LD F  ++   ++ DLGFSG  FTW N H  G T 
Sbjct: 310 LCAGDFNEILYHYEKEGGIPRTQACLDRFKEVLETCELDDLGFSGDVFTWRNKHNKGSTY 369

Query: 178 IRERLDRAIANVE*LDIFPMACVSHIATSSSDH 276
           IRERLDRA+AN+     FP+  V +  T  SDH
Sbjct: 370 IRERLDRAVANMSWRMKFPLVNVKNGDTYHSDH 402


>ref|XP_002447968.1| hypothetical protein SORBIDRAFT_06g019043 [Sorghum bicolor]
           gi|241939151|gb|EES12296.1| hypothetical protein
           SORBIDRAFT_06g019043 [Sorghum bicolor]
          Length = 678

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 39/92 (42%), Positives = 52/92 (56%)
 Frame = +1

Query: 1   LILGDFNAVVCSTEKEGGNPIPPRHLDDFVSLINDFDITDLGFSGASFTWSNHRMGETNI 180
           L  GDFN ++ + E+ GG   P R +D F   ++     DLGFSG  +TW N + G  NI
Sbjct: 389 LCAGDFNEILEANEQFGGVQRPERQMDGFRDALSACGFFDLGFSGLPYTWDNRQEGNHNI 448

Query: 181 RERLDRAIANVE*LDIFPMACVSHIATSSSDH 276
           + RLDRA AN    D+F    V+H  T+ SDH
Sbjct: 449 KVRLDRAFANATFADLFRQIKVNHEQTTESDH 480


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 42/92 (45%), Positives = 50/92 (54%)
 Frame = +1

Query: 1   LILGDFNAVVCSTEKEGGNPIPPRHLDDFVSLINDFDITDLGFSGASFTWSNHRMGETNI 180
           L  GDFN +    EKEGG P   R +D F  +I+D  + DLG+ G  FTW       T I
Sbjct: 133 LFFGDFNEITSIEEKEGGAPRCERVMDAFREVIDDCAVKDLGYVGNRFTWQRGNSPSTLI 192

Query: 181 RERLDRAIANVE*LDIFPMACVSHIATSSSDH 276
           RERLDR +AN E  D FP   V H+    SDH
Sbjct: 193 RERLDRMLANDEWCDNFPSWEVVHLPRYRSDH 224


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