BLASTX nr result

ID: Coptis23_contig00037870 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037870
         (632 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524795.1| conserved hypothetical protein [Ricinus comm...   310   2e-82
ref|NP_182327.6| uncharacterized protein [Arabidopsis thaliana] ...   303   2e-80
ref|XP_002321052.1| predicted protein [Populus trichocarpa] gi|2...   300   1e-79
ref|XP_003632363.1| PREDICTED: uncharacterized protein LOC100254...   299   2e-79
ref|XP_003520219.1| PREDICTED: uncharacterized protein LOC100792...   290   1e-76

>ref|XP_002524795.1| conserved hypothetical protein [Ricinus communis]
           gi|223535979|gb|EEF37638.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 2254

 Score =  310 bits (793), Expect = 2e-82
 Identities = 152/205 (74%), Positives = 179/205 (87%)
 Frame = -3

Query: 630 KPGFIHAVYMVFFLMFLLSHTINKNGRRSLILLCEIHFALLYILRLDLVSKFLEEKGSLT 451
           KPGFIHA YM+FFL++LLSH I++  R+S+ILLCE HFALLYIL++DL+S  LE+ GS T
Sbjct: 322 KPGFIHATYMIFFLIYLLSHDISRKIRQSMILLCEAHFALLYILQIDLISHTLEQTGSST 381

Query: 450 MGILSKLGVLVCASSWDFLRIAVLMCFSAIHNHGIEMLFSFSAIVQHTPCPPVGFSILKA 271
           M +L +LG+L   SSWDFL IA+L CF AIHNHG EMLFSFSAIVQHTP PPVGFSILKA
Sbjct: 382 MEVLLQLGLLKQDSSWDFLEIALLACFCAIHNHGFEMLFSFSAIVQHTPSPPVGFSILKA 441

Query: 270 GLNKSVILSVYASPTARQSQFDNFSHERRIATFLNSIGQKFLSVYRACGTYIAFLTILIA 91
           GLNKSV+LSVYASPTA+ S  D+ S+E RIA FL+++GQKFLS+YR+CGTYIAFLTIL+A
Sbjct: 442 GLNKSVLLSVYASPTAKYSH-DHHSYESRIAAFLSAVGQKFLSMYRSCGTYIAFLTILLA 500

Query: 90  VYLVTPNYVSFGYLFLLLFWIIGRQ 16
           VYLVTPNY+SFGY+FLLL WIIGRQ
Sbjct: 501 VYLVTPNYISFGYIFLLLVWIIGRQ 525


>ref|NP_182327.6| uncharacterized protein [Arabidopsis thaliana]
            gi|330255833|gb|AEC10927.1| uncharacterized protein
            [Arabidopsis thaliana]
          Length = 2462

 Score =  303 bits (775), Expect = 2e-80
 Identities = 147/209 (70%), Positives = 179/209 (85%)
 Frame = -3

Query: 630  KPGFIHAVYMVFFLMFLLSHTINKNGRRSLILLCEIHFALLYILRLDLVSKFLEEKGSLT 451
            KPGF HAVY++FFLM+LLSH IN+  R+SLILLCE+HFALLYIL +DLVS  L+++GS +
Sbjct: 474  KPGFFHAVYVIFFLMYLLSHNINRKIRKSLILLCEVHFALLYILEIDLVSNSLKQEGSAS 533

Query: 450  MGILSKLGVLVCASSWDFLRIAVLMCFSAIHNHGIEMLFSFSAIVQHTPCPPVGFSILKA 271
              +L +LG+L   SSWDFL IA+L CF AIHNHG E+LFSFSAIV+HTP PP+GFSILKA
Sbjct: 534  REVLFQLGLLRSESSWDFLEIALLACFCAIHNHGFEVLFSFSAIVRHTPSPPIGFSILKA 593

Query: 270  GLNKSVILSVYASPTARQSQFDNFSHERRIATFLNSIGQKFLSVYRACGTYIAFLTILIA 91
            GLNKSV+LSVY+SP++  SQ DN ++ER IA+FL++IGQKFLS+YR+CGTYIAF+TILI+
Sbjct: 594  GLNKSVLLSVYSSPSSSYSQ-DNTTYERHIASFLSAIGQKFLSMYRSCGTYIAFITILIS 652

Query: 90   VYLVTPNYVSFGYLFLLLFWIIGRQTCRE 4
            VYLV PNYVSFGY+FLLL WI GRQ   E
Sbjct: 653  VYLVKPNYVSFGYIFLLLLWITGRQLFEE 681


>ref|XP_002321052.1| predicted protein [Populus trichocarpa] gi|222861825|gb|EEE99367.1|
           predicted protein [Populus trichocarpa]
          Length = 1752

 Score =  300 bits (769), Expect = 1e-79
 Identities = 147/205 (71%), Positives = 173/205 (84%)
 Frame = -3

Query: 630 KPGFIHAVYMVFFLMFLLSHTINKNGRRSLILLCEIHFALLYILRLDLVSKFLEEKGSLT 451
           KPG IHAVY++FFL++LLSH I++  R+ LILLCE+HFA+LYIL ++L+S  LE KGSLT
Sbjct: 75  KPGIIHAVYLIFFLIYLLSHNISRKIRQPLILLCEVHFAMLYILEINLISHALERKGSLT 134

Query: 450 MGILSKLGVLVCASSWDFLRIAVLMCFSAIHNHGIEMLFSFSAIVQHTPCPPVGFSILKA 271
           M +L +LG+L   SSWDFL+IA+L CF AIHNHG EMLFSFSAIVQHTP PP+GFSILKA
Sbjct: 135 MEVLLQLGLLKHHSSWDFLKIALLACFCAIHNHGFEMLFSFSAIVQHTPSPPIGFSILKA 194

Query: 270 GLNKSVILSVYASPTARQSQFDNFSHERRIATFLNSIGQKFLSVYRACGTYIAFLTILIA 91
           GLNKSV+LSVYAS T R    DN S+E RIA FL +IGQKFL+ YR+CGTYIAFLTIL+ 
Sbjct: 195 GLNKSVLLSVYASSTTRYGH-DNSSYESRIALFLGAIGQKFLTTYRSCGTYIAFLTILLT 253

Query: 90  VYLVTPNYVSFGYLFLLLFWIIGRQ 16
           VYLV PNY+SFGY+FLLL WIIGRQ
Sbjct: 254 VYLVKPNYISFGYIFLLLVWIIGRQ 278


>ref|XP_003632363.1| PREDICTED: uncharacterized protein LOC100254568 [Vitis vinifera]
          Length = 2489

 Score =  299 bits (766), Expect = 2e-79
 Identities = 145/205 (70%), Positives = 179/205 (87%)
 Frame = -3

Query: 630  KPGFIHAVYMVFFLMFLLSHTINKNGRRSLILLCEIHFALLYILRLDLVSKFLEEKGSLT 451
            KPGFIHAVYMVFFL++LLSH I++   +SLILLCE+HFALLYIL+L+L+S+ LEEKGS++
Sbjct: 499  KPGFIHAVYMVFFLIYLLSHNISRKTCQSLILLCEVHFALLYILQLNLISRTLEEKGSIS 558

Query: 450  MGILSKLGVLVCASSWDFLRIAVLMCFSAIHNHGIEMLFSFSAIVQHTPCPPVGFSILKA 271
            M ILS++G+L    SWD L IA+L C  A+H HG ++LFSFSA+VQHTP PP+GFSILKA
Sbjct: 559  MEILSQIGLLEHDHSWDSLEIAMLACCCAVHKHGFDVLFSFSAMVQHTPNPPIGFSILKA 618

Query: 270  GLNKSVILSVYASPTARQSQFDNFSHERRIATFLNSIGQKFLSVYRACGTYIAFLTILIA 91
            GLNKSV+LS+Y+S T R    DN SHERRIA+FL++IGQ+FLS+YR+CGTYIAF+TIL+A
Sbjct: 619  GLNKSVLLSIYSSSTTRDCN-DNRSHERRIASFLSAIGQQFLSMYRSCGTYIAFMTILLA 677

Query: 90   VYLVTPNYVSFGYLFLLLFWIIGRQ 16
            VYLVTPNY+SFGY+FLLL WIIGRQ
Sbjct: 678  VYLVTPNYISFGYIFLLLVWIIGRQ 702


>ref|XP_003520219.1| PREDICTED: uncharacterized protein LOC100792646 [Glycine max]
          Length = 2460

 Score =  290 bits (743), Expect = 1e-76
 Identities = 136/205 (66%), Positives = 177/205 (86%)
 Frame = -3

Query: 630  KPGFIHAVYMVFFLMFLLSHTINKNGRRSLILLCEIHFALLYILRLDLVSKFLEEKGSLT 451
            KPGFIHAVYM+FFLM+LLSH +++  R++LILLCEIHF+LLY+L+++L+S  LE+KGSL+
Sbjct: 474  KPGFIHAVYMIFFLMYLLSHDVSRKMRQALILLCEIHFSLLYVLQINLISTALEKKGSLS 533

Query: 450  MGILSKLGVLVCASSWDFLRIAVLMCFSAIHNHGIEMLFSFSAIVQHTPCPPVGFSILKA 271
            M ++ +LG+    S+WDFL +A+L CF AIHNHG EMLFSFSAI+QH P PP+GF ILKA
Sbjct: 534  MEVVMQLGLRKEDSAWDFLEVALLACFCAIHNHGFEMLFSFSAIIQHAPGPPIGFGILKA 593

Query: 270  GLNKSVILSVYASPTARQSQFDNFSHERRIATFLNSIGQKFLSVYRACGTYIAFLTILIA 91
            GLNKSV+LSVY+S + R S  ++ S+ERRIA++L++IGQKFLS+YR+CGTYIAF+TIL+ 
Sbjct: 594  GLNKSVLLSVYSSSSVRNSD-ESLSYERRIASYLSAIGQKFLSIYRSCGTYIAFVTILLT 652

Query: 90   VYLVTPNYVSFGYLFLLLFWIIGRQ 16
            VY+V PN +SFGY+FLLL WIIGRQ
Sbjct: 653  VYMVRPNCISFGYIFLLLLWIIGRQ 677


Top