BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037867
         (528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633119.1| PREDICTED: E3 ubiquitin-protein ligase RNF11...    86   4e-15
emb|CBI28007.3| unnamed protein product [Vitis vinifera]               86   4e-15
ref|XP_002514228.1| hypothetical protein RCOM_1049910 [Ricinus c...    84   1e-14
ref|XP_004157948.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    84   1e-14
ref|XP_002332344.1| predicted protein [Populus trichocarpa] gi|2...    82   5e-14

>ref|XP_003633119.1| PREDICTED: E3 ubiquitin-protein ligase RNF115-like [Vitis vinifera]
          Length = 102

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 40/86 (46%), Positives = 56/86 (65%)
 Frame = +1

Query: 115 IDSCFDLDLALTTPVQSSLVTKEPDFRVAELPTVSSIGGVCMICMEEFNRGKDVAKRLAC 294
           ID CFDLDLA+T    +S ++K     V+ +PTV+++   C +C E F  G+   K+L C
Sbjct: 16  IDLCFDLDLAITAVDDTSEISKSTSM-VSTMPTVTAVDA-CTVCREGFQSGEG-GKQLPC 72

Query: 295 NHVYHETCVSTWLSQNNSCPLCRCSI 372
            H YH  C+++WLS  NSCPLCRCS+
Sbjct: 73  GHFYHAGCIASWLSLRNSCPLCRCSV 98


>emb|CBI28007.3| unnamed protein product [Vitis vinifera]
          Length = 168

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 40/86 (46%), Positives = 56/86 (65%)
 Frame = +1

Query: 115 IDSCFDLDLALTTPVQSSLVTKEPDFRVAELPTVSSIGGVCMICMEEFNRGKDVAKRLAC 294
           ID CFDLDLA+T    +S ++K     V+ +PTV+++   C +C E F  G+   K+L C
Sbjct: 82  IDLCFDLDLAITAVDDTSEISKSTSM-VSTMPTVTAVDA-CTVCREGFQSGEG-GKQLPC 138

Query: 295 NHVYHETCVSTWLSQNNSCPLCRCSI 372
            H YH  C+++WLS  NSCPLCRCS+
Sbjct: 139 GHFYHAGCIASWLSLRNSCPLCRCSV 164


>ref|XP_002514228.1| hypothetical protein RCOM_1049910 [Ricinus communis]
           gi|223546684|gb|EEF48182.1| hypothetical protein
           RCOM_1049910 [Ricinus communis]
          Length = 109

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 45/100 (45%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
 Frame = +1

Query: 79  SLRDTPAMSTFSIDSCFDLDLALTTPVQSSLVTKEPDFRVAELPTVSSIGG--VCMICME 252
           S       ST  ID  FD+D AL  P        E D  VA++PTV+S     VC ICME
Sbjct: 5   SSNSNSTFSTCLIDVSFDMDEALALPPNFGHQISESDSLVADMPTVTSTDDHDVCSICME 64

Query: 253 EFNRGKDVAKRLACNHVYHETCVSTWLSQNNSCPLCRCSI 372
            F       K++ C HVYH  C+S+WLS  NSCPLCR +I
Sbjct: 65  GFQSPGVCGKQVPCGHVYHAPCISSWLSNCNSCPLCRFNI 104


>ref|XP_004157948.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 116

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 42/89 (47%), Positives = 55/89 (61%), Gaps = 3/89 (3%)
 Frame = +1

Query: 115 IDSCFDLDLALTTP---VQSSLVTKEPDFRVAELPTVSSIGGVCMICMEEFNRGKDVAKR 285
           I+S FDLD  LT          V   P   VAELPTV++   VC +CME+F   +   K+
Sbjct: 15  IESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAVCMEDFLPDEG-GKQ 73

Query: 286 LACNHVYHETCVSTWLSQNNSCPLCRCSI 372
           + C HVYH++C+S+WLS  +SCPLCRC I
Sbjct: 74  IPCGHVYHQSCLSSWLSIRDSCPLCRCHI 102


>ref|XP_002332344.1| predicted protein [Populus trichocarpa] gi|222832065|gb|EEE70542.1|
           predicted protein [Populus trichocarpa]
          Length = 99

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 44/92 (47%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
 Frame = +1

Query: 103 STFSIDSCFDLDLALTTPVQ-SSLVTKEPDFRVAELPTVSSIG-GVCMICMEEFNRGKDV 276
           S+  ID+ FDLD ALT P   S  +T      VA++PT  + G  VC +CME F  G   
Sbjct: 7   SSCLIDTSFDLDEALTLPQNLSQQITYSNSTIVADMPTALTTGDAVCAVCMEGFQSGIG- 65

Query: 277 AKRLACNHVYHETCVSTWLSQNNSCPLCRCSI 372
            K++ C HVYHE C+S  LS  +SCPLCRC I
Sbjct: 66  GKKVPCGHVYHEACISALLSHRHSCPLCRCDI 97