BLASTX nr result

ID: Coptis23_contig00037856 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037856
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN59902.1| hypothetical protein VITISV_002890 [Vitis vinifera]   125   4e-27
ref|XP_002282368.1| PREDICTED: uncharacterized protein LOC100255...   125   5e-27
ref|NP_001235034.1| uncharacterized protein LOC100526853 [Glycin...   124   1e-26
ref|XP_002313589.1| predicted protein [Populus trichocarpa] gi|2...   122   4e-26
ref|XP_003618105.1| hypothetical protein MTR_5g099030 [Medicago ...   119   2e-25

>emb|CAN59902.1| hypothetical protein VITISV_002890 [Vitis vinifera]
          Length = 227

 Score =  125 bits (314), Expect = 4e-27
 Identities = 60/94 (63%), Positives = 73/94 (77%)
 Frame = +3

Query: 3   PFIGPEGGESVADVVSRLAVAIDSLEKEFQGCVILIVSHGDPLQILQTVLHAANQQNGPD 182
           PF  PEGGES ADV  RLA A+ ++E EFQGC IL+VSHGDPLQILQT+L+A  +   P 
Sbjct: 134 PFTRPEGGESAADVAGRLAHAMATMESEFQGCAILVVSHGDPLQILQTILNAVKEDREPR 193

Query: 183 GGDVVLKLEAVKVPSILSQHRKFALQTGELRPIL 284
             D+  ++EAV+VPSILSQHRKFAL TGELR ++
Sbjct: 194 SNDLASRIEAVRVPSILSQHRKFALLTGELRAVI 227


>ref|XP_002282368.1| PREDICTED: uncharacterized protein LOC100255613 [Vitis vinifera]
           gi|297744495|emb|CBI37757.3| unnamed protein product
           [Vitis vinifera]
          Length = 227

 Score =  125 bits (313), Expect = 5e-27
 Identities = 60/94 (63%), Positives = 73/94 (77%)
 Frame = +3

Query: 3   PFIGPEGGESVADVVSRLAVAIDSLEKEFQGCVILIVSHGDPLQILQTVLHAANQQNGPD 182
           PF  PEGGES ADV  RLA A+ ++E EFQGC IL+VSHGDPLQILQT+L+A  +   P 
Sbjct: 134 PFTRPEGGESAADVACRLAHAMATMESEFQGCAILVVSHGDPLQILQTILNAVKEDREPR 193

Query: 183 GGDVVLKLEAVKVPSILSQHRKFALQTGELRPIL 284
             D+  ++EAV+VPSILSQHRKFAL TGELR ++
Sbjct: 194 SNDLASRIEAVRVPSILSQHRKFALLTGELRAVI 227


>ref|NP_001235034.1| uncharacterized protein LOC100526853 [Glycine max]
           gi|255630992|gb|ACU15860.1| unknown [Glycine max]
          Length = 225

 Score =  124 bits (310), Expect = 1e-26
 Identities = 60/94 (63%), Positives = 72/94 (76%)
 Frame = +3

Query: 3   PFIGPEGGESVADVVSRLAVAIDSLEKEFQGCVILIVSHGDPLQILQTVLHAANQQNGPD 182
           PF+GPEGGESV DV  RLA A+ ++E EFQGC +L+VSHGDPLQILQT+LHAAN+   P 
Sbjct: 132 PFLGPEGGESVKDVACRLATAMATMESEFQGCAVLVVSHGDPLQILQTILHAANEHREPT 191

Query: 183 GGDVVLKLEAVKVPSILSQHRKFALQTGELRPIL 284
             D+   L AV+V  ILSQHRK AL TGELR ++
Sbjct: 192 YNDLASILTAVQVAPILSQHRKHALLTGELRAVI 225


>ref|XP_002313589.1| predicted protein [Populus trichocarpa] gi|222849997|gb|EEE87544.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score =  122 bits (305), Expect = 4e-26
 Identities = 60/93 (64%), Positives = 70/93 (75%)
 Frame = +3

Query: 3   PFIGPEGGESVADVVSRLAVAIDSLEKEFQGCVILIVSHGDPLQILQTVLHAANQQNGPD 182
           PF  PEGGESV DV +RL  A+  +E EFQGC +LIVSHGDPLQILQTVL+A  Q     
Sbjct: 134 PFTRPEGGESVDDVATRLESALAIIESEFQGCAVLIVSHGDPLQILQTVLNATKQNTESS 193

Query: 183 GGDVVLKLEAVKVPSILSQHRKFALQTGELRPI 281
             D+   ++AVKVPS+LSQHRKFAL TGELRP+
Sbjct: 194 SNDLASIIQAVKVPSVLSQHRKFALVTGELRPV 226


>ref|XP_003618105.1| hypothetical protein MTR_5g099030 [Medicago truncatula]
           gi|355519440|gb|AET01064.1| hypothetical protein
           MTR_5g099030 [Medicago truncatula]
          Length = 223

 Score =  119 bits (299), Expect = 2e-25
 Identities = 57/94 (60%), Positives = 72/94 (76%)
 Frame = +3

Query: 3   PFIGPEGGESVADVVSRLAVAIDSLEKEFQGCVILIVSHGDPLQILQTVLHAANQQNGPD 182
           P +GPEGGESV DV SRLA  +  +E+EF+GC IL+VSHGDPLQILQT+LHAA +   P 
Sbjct: 130 PLVGPEGGESVKDVASRLAKTMAIIEQEFEGCAILVVSHGDPLQILQTILHAAKKHKEPT 189

Query: 183 GGDVVLKLEAVKVPSILSQHRKFALQTGELRPIL 284
             D+   LEAV+V  ILS+HR++AL TGELR ++
Sbjct: 190 SNDLASILEAVQVAPILSKHRQYALNTGELRRVI 223


Top