BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037851
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE51862.1| hypothetical protein OsJ_33393 [Oryza sativa Japo...    75   7e-12
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ...    69   5e-10
gb|AAP53315.2| retrotransposon protein, putative, unclassified [...    69   5e-10
gb|EEC68711.1| hypothetical protein OsI_37193 [Oryza sativa Indi...    68   7e-10
gb|EEC84982.1| hypothetical protein OsI_32248 [Oryza sativa Indi...    67   1e-09

>gb|EEE51862.1| hypothetical protein OsJ_33393 [Oryza sativa Japonica Group]
          Length = 662

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 47/123 (38%), Positives = 70/123 (56%), Gaps = 7/123 (5%)
 Frame = -3

Query: 366 LVNRLNPLPSKYISPHRRAFVP*RFIGDNVGLVYETIYMFLKRYLEHEKQ-KKGWLTLKL 190
           L NRL  +  + ISP + AFVP R I DN+ + YE     +  Y+  +K+ K G+  +KL
Sbjct: 215 LANRLKTILPEVISPTQSAFVPGRLISDNILVAYE-----MTHYMRSKKRGKMGYAAIKL 269

Query: 189 DMANAYDRIE*NFLLDIIC*LGFSFKWVSLIT*PLPQHCI------YRGLNLLDTVFF*V 28
           DM+ AYDR+E +FL D++  LGF+ +W++L+      HC+       +    L  VF  V
Sbjct: 270 DMSKAYDRVEWSFLRDMMLWLGFNAEWINLV-----MHCVTSVSYKIKVNGDLSEVFSPV 324

Query: 27  GFS 19
           GFS
Sbjct: 325 GFS 327


>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1509

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
 Frame = -3

Query: 366 LVNRLNPLPSKYISPHRRAFVP*RFIGDNVGLVYE-TIYMFLKRYLEHEKQKKGWLTLKL 190
           L NRL  +    ISP + AFVP R I DN+ + YE T YM  KR       + G+   KL
Sbjct: 722 LANRLKKILPDVISPAQSAFVPGRLISDNILIAYEMTHYMRNKR-----SGQVGYAAFKL 776

Query: 189 DMANAYDRIE*NFLLDIIC*LGFSFKWVSLI 97
           DM+ AYDR+E +FL D++  LGF   WV+LI
Sbjct: 777 DMSKAYDRVEWSFLHDMMLKLGFHTDWVNLI 807


>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1505

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
 Frame = -3

Query: 366 LVNRLNPLPSKYISPHRRAFVP*RFIGDNVGLVYE-TIYMFLKRYLEHEKQKKGWLTLKL 190
           L NRL  +    ISP + AFVP R I DN+ + YE T YM  KR       + G+   KL
Sbjct: 718 LANRLKKILPDVISPAQSAFVPGRLISDNILIAYEMTHYMRNKR-----SGQVGYAAFKL 772

Query: 189 DMANAYDRIE*NFLLDIIC*LGFSFKWVSLI 97
           DM+ AYDR+E +FL D++  LGF   WV+LI
Sbjct: 773 DMSKAYDRVEWSFLHDMMLKLGFHTDWVNLI 803


>gb|EEC68711.1| hypothetical protein OsI_37193 [Oryza sativa Indica Group]
          Length = 1546

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 38/87 (43%), Positives = 52/87 (59%)
 Frame = -3

Query: 357 RLNPLPSKYISPHRRAFVP*RFIGDNVGLVYETIYMFLKRYLEHEKQKKGWLTLKLDMAN 178
           RL  +  + IS H+ AFVP R I DN+ L YE I+      ++ +K +KG   +KLDM  
Sbjct: 297 RLKQILPEIISDHQSAFVPGRLITDNILLAYECIHT-----MKRKKGRKGLCAVKLDMHK 351

Query: 177 AYDRIE*NFLLDIIC*LGFSFKWVSLI 97
           AYDR+E  FL  I+  LGF  +W+ LI
Sbjct: 352 AYDRVEWGFLEKIMTKLGFDQRWIKLI 378


>gb|EEC84982.1| hypothetical protein OsI_32248 [Oryza sativa Indica Group]
           gi|222630794|gb|EEE62926.1| hypothetical protein
           OsJ_17731 [Oryza sativa Japonica Group]
          Length = 893

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
 Frame = -3

Query: 366 LVNRLNPLPSKYISPHRRAFVP*RFIGDNVGLVYE-TIYMFLKRYLEHEKQKKGWLTLKL 190
           L NRL  +    ISP++ AFVP R I DNV L YE T +M  KR       ++G+  LKL
Sbjct: 196 LSNRLKLILPDIISPNQSAFVPQRLITDNVLLAYEMTHFMQTKR-----TGREGYAALKL 250

Query: 189 DMANAYDRIE*NFLLDIIC*LGFSFKWVSLI 97
           DM+ AYDR+E +FL  ++  LGF+  WV LI
Sbjct: 251 DMSKAYDRVEWSFLEKMMVRLGFAEGWVKLI 281