BLASTX nr result

ID: Coptis23_contig00037842 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037842
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277256.1| PREDICTED: protein kinase 2B, chloroplastic ...   141   6e-32
ref|XP_002311595.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-30
ref|XP_002315799.1| predicted protein [Populus trichocarpa] gi|2...   132   2e-29
ref|XP_003519043.1| PREDICTED: LOW QUALITY PROTEIN: protein kina...   132   3e-29
ref|XP_003517946.1| PREDICTED: LOW QUALITY PROTEIN: protein kina...   132   3e-29

>ref|XP_002277256.1| PREDICTED: protein kinase 2B, chloroplastic [Vitis vinifera]
           gi|296086406|emb|CBI31995.3| unnamed protein product
           [Vitis vinifera]
          Length = 420

 Score =  141 bits (355), Expect = 6e-32
 Identities = 68/94 (72%), Positives = 80/94 (85%)
 Frame = +2

Query: 2   LTGRHAVDKSKVGMEQNLVDWAKPYMMDKRKLFRIMDTKLEGQYSQKGAYMAAVLALQCL 181
           L+GR AVDK+K+G+EQNLVDWAKPY+ DKR+LFRIMDTKLEGQY QKGA+MAA LALQCL
Sbjct: 289 LSGRRAVDKTKIGVEQNLVDWAKPYLGDKRRLFRIMDTKLEGQYPQKGAFMAATLALQCL 348

Query: 182 RNKAKSRPNMGYVLSSLEQIQAPKDTLKRSQSEQ 283
             +AK RP M  VL++LEQIQ+PK+  K  QSEQ
Sbjct: 349 NTEAKVRPRMSEVLATLEQIQSPKNAAKHIQSEQ 382


>ref|XP_002311595.1| predicted protein [Populus trichocarpa] gi|222851415|gb|EEE88962.1|
           predicted protein [Populus trichocarpa]
          Length = 418

 Score =  136 bits (342), Expect = 2e-30
 Identities = 67/94 (71%), Positives = 78/94 (82%)
 Frame = +2

Query: 2   LTGRHAVDKSKVGMEQNLVDWAKPYMMDKRKLFRIMDTKLEGQYSQKGAYMAAVLALQCL 181
           L+GR AVDK+KVG+EQNL DWAKPY+ DKRKLFRIMDTKL GQY QKGA+MAA LALQCL
Sbjct: 287 LSGRRAVDKTKVGVEQNLADWAKPYLGDKRKLFRIMDTKLGGQYPQKGAFMAANLALQCL 346

Query: 182 RNKAKSRPNMGYVLSSLEQIQAPKDTLKRSQSEQ 283
            N+AK RP M  VL++LE I++PK   K S+SEQ
Sbjct: 347 SNEAKVRPRMSEVLATLENIESPKGAAKNSRSEQ 380


>ref|XP_002315799.1| predicted protein [Populus trichocarpa] gi|222864839|gb|EEF01970.1|
           predicted protein [Populus trichocarpa]
          Length = 417

 Score =  132 bits (333), Expect = 2e-29
 Identities = 66/93 (70%), Positives = 76/93 (81%)
 Frame = +2

Query: 2   LTGRHAVDKSKVGMEQNLVDWAKPYMMDKRKLFRIMDTKLEGQYSQKGAYMAAVLALQCL 181
           L+GR AVDKSKVG+EQNLVDW KPY+ DKRKLFRIMDTKL GQY QKGA+MAA LALQCL
Sbjct: 286 LSGRRAVDKSKVGVEQNLVDWVKPYLGDKRKLFRIMDTKLGGQYPQKGAFMAANLALQCL 345

Query: 182 RNKAKSRPNMGYVLSSLEQIQAPKDTLKRSQSE 280
             +AK RP M  VL++LEQI++PK  +K  Q E
Sbjct: 346 STEAKVRPRMSEVLATLEQIESPKGAVKNIQLE 378


>ref|XP_003519043.1| PREDICTED: LOW QUALITY PROTEIN: protein kinase 2B,
           chloroplastic-like [Glycine max]
          Length = 414

 Score =  132 bits (332), Expect = 3e-29
 Identities = 65/93 (69%), Positives = 77/93 (82%)
 Frame = +2

Query: 2   LTGRHAVDKSKVGMEQNLVDWAKPYMMDKRKLFRIMDTKLEGQYSQKGAYMAAVLALQCL 181
           L+GR AVDK+  GMEQNLVDWAKPY+ DKR+LFRIMDTKLEGQY QKGA+ AA LALQCL
Sbjct: 281 LSGRRAVDKTITGMEQNLVDWAKPYLSDKRRLFRIMDTKLEGQYPQKGAFTAATLALQCL 340

Query: 182 RNKAKSRPNMGYVLSSLEQIQAPKDTLKRSQSE 280
            ++AK+RP M  VL++LEQI+APK   + S SE
Sbjct: 341 NSEAKARPPMTEVLATLEQIEAPKTAGRNSHSE 373


>ref|XP_003517946.1| PREDICTED: LOW QUALITY PROTEIN: protein kinase 2B,
           chloroplastic-like [Glycine max]
          Length = 422

 Score =  132 bits (332), Expect = 3e-29
 Identities = 65/93 (69%), Positives = 77/93 (82%)
 Frame = +2

Query: 2   LTGRHAVDKSKVGMEQNLVDWAKPYMMDKRKLFRIMDTKLEGQYSQKGAYMAAVLALQCL 181
           L+GR AVDK+  GMEQNLVDWAKPY+ DKR+LFRIMDTKLEGQY QKGA+ AA LALQCL
Sbjct: 281 LSGRRAVDKTITGMEQNLVDWAKPYLSDKRRLFRIMDTKLEGQYPQKGAFTAATLALQCL 340

Query: 182 RNKAKSRPNMGYVLSSLEQIQAPKDTLKRSQSE 280
            ++AK+RP M  VL++LEQI+APK   + S SE
Sbjct: 341 NSEAKARPPMTEVLATLEQIEAPKTAGRNSHSE 373


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