BLASTX nr result

ID: Coptis23_contig00037841 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037841
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
ref|XP_002865536.1| hypothetical protein ARALYDRAFT_917542 [Arab...    55   8e-06

>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
            predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
 Frame = +2

Query: 2    LIENGQWQLPQTFRRHCPDLVQSIEEEVKLHTGD-DEVIWFVTLRGDYGLKETYGSMRQT 178
            LI+N +W+ P T       ++++I        G  DE+IW  +    + +K  +  +R+ 
Sbjct: 810  LIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKMGQKDEIIWLDSPNHRFSVKVAWEQLRRH 869

Query: 179  RQKINWHNIVWFANRIPRFSFINWL 253
            RQ + WH+IVWF N +PR SF+ W+
Sbjct: 870  RQLVEWHDIVWFKNAVPRHSFLLWM 894


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
 Frame = +2

Query: 2   LIENGQWQLPQTFRRHCPDLVQSIEEEVKLHTGD-DEVIWFVTLRGDYGLKETYGSMRQT 178
           LI+N +W+ P T       ++++I        G  DE++W  +    + +K  +  +R+ 
Sbjct: 277 LIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKMGQKDELVWLDSPNHRFSVKVAWEQLRRH 336

Query: 179 RQKINWHNIVWFANRIPRFSFINWL 253
           RQ + WH+IVWF N +PR SF+ W+
Sbjct: 337 RQMVEWHDIVWFKNAVPRHSFLLWM 361


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
 Frame = +2

Query: 2    LIENGQWQLPQTFRRHCPDLVQSIEEEVKLHTGD-DEVIWFVTLRGDYGLKETYGSMRQT 178
            LI+N +W+ P T       ++++I        G  DE++W  +    + +K  +  +R+ 
Sbjct: 1150 LIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKMGQKDEIVWLDSPNHRFLVKVAWEHLRRH 1209

Query: 179  RQKINWHNIVWFANRIPRFSFINWL 253
            RQ + WH+IVWF N +PR SF+ W+
Sbjct: 1210 RQMVEWHDIVWFKNAVPRHSFLLWM 1234


>ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
 Frame = +2

Query: 2   LIENGQWQLPQTFRRHCPDLVQSIEEEVKLHTGD-DEVIWFVTLRGDYGLKETYGSMRQT 178
           LI+N +W+ P T       ++++I        G  DE++W  +    + +K  +  +R+ 
Sbjct: 95  LIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKMGQKDEIVWLDSPNHRFSVKVAWEQLRRH 154

Query: 179 RQKINWHNIVWFANRIPRFSFINWL 253
           R  + WH+IVWF N +PR SF+ W+
Sbjct: 155 RHMVEWHDIVWFKNAVPRHSFLLWM 179


>ref|XP_002865536.1| hypothetical protein ARALYDRAFT_917542 [Arabidopsis lyrata subsp.
           lyrata] gi|297311371|gb|EFH41795.1| hypothetical protein
           ARALYDRAFT_917542 [Arabidopsis lyrata subsp. lyrata]
          Length = 227

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
 Frame = +2

Query: 5   IENGQWQLPQTFRRHCPDLVQSIEEEV--KLHTGDDEVIWFVTLR---GDYGLKETYGSM 169
           ++  QW++ +   +   ++V  ++E    +   G D+ +W  TL      +  + T+  +
Sbjct: 13  VQGTQWRVRRCRSQTLRNVVTKLQEIAPPQRAKGPDKPLWRYTLDDYDSSFTSRHTWNLL 72

Query: 170 RQTRQKINWHNIVWFANRIPRFSFINWL 253
           R+ + K+ WHN VWF  R+PR+SFI WL
Sbjct: 73  RKAKHKVLWHNSVWFPQRVPRYSFIVWL 100


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