BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037828
         (816 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633831.1| PREDICTED: E3 ubiquitin-protein ligase ATL42...   158   1e-36
ref|XP_002517352.1| zinc finger protein, putative [Ricinus commu...   126   5e-27
ref|XP_003634293.1| PREDICTED: RING-H2 finger protein ATL48-like...   124   3e-26
gb|AFK38839.1| unknown [Lotus japonicus]                              118   1e-24
ref|XP_002511421.1| conserved hypothetical protein [Ricinus comm...   117   3e-24

>ref|XP_003633831.1| PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Vitis vinifera]
          Length = 188

 Score =  158 bits (400), Expect = 1e-36
 Identities = 84/157 (53%), Positives = 101/157 (64%), Gaps = 19/157 (12%)
 Frame = -2

Query: 665 YRWTFAPVNIVPRRRSTCYNMPSVDLGKLPCYDFKAEEK-DSNPVDCAVCLENLKVGDRC 489
           +R  F    +V R      +M   DL KLPC+ F+A+EK  S+PVDCAVCL+N K+GD+C
Sbjct: 29  FRGGFGNGRMVERGNPRSTSMSLDDLDKLPCFHFQAKEKGSSSPVDCAVCLDNFKMGDKC 88

Query: 488 RLLPRCNHSFHSQCIDSWLLKTPICPICRTSANLKKSCMVSGEGSSHPGEVGFEFRESQQ 309
           RLLP CNHSFH+QC+DSWLLKTPICPICRTSA+ +K  +VSGE SSH  + G E RESQ 
Sbjct: 89  RLLPLCNHSFHAQCVDSWLLKTPICPICRTSADFRKGSLVSGEESSHFSDTGNELRESQT 148

Query: 308 T------------------AGGIQLSSNTSPLQNSPA 252
           T                    GI LSSN SP  N+PA
Sbjct: 149 TERGHMGDAGIDSRDNPGAVSGIHLSSNHSP--NNPA 183


>ref|XP_002517352.1| zinc finger protein, putative [Ricinus communis]
           gi|223543363|gb|EEF44894.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 200

 Score =  126 bits (317), Expect = 5e-27
 Identities = 55/96 (57%), Positives = 69/96 (71%)
 Frame = -2

Query: 593 DLGKLPCYDFKAEEKDSNPVDCAVCLENLKVGDRCRLLPRCNHSFHSQCIDSWLLKTPIC 414
           DL KLP +DF A+ K S+PVDCAVCL+N + GD+CRLLP C HSFH+QC+D WLLKTPIC
Sbjct: 55  DLEKLPSFDFIAKGKGSSPVDCAVCLDNFRAGDKCRLLPICKHSFHAQCVDEWLLKTPIC 114

Query: 413 PICRTSANLKKSCMVSGEGSSHPGEVGFEFRESQQT 306
           PICR SA  ++  +  GE SSH  +   + R +  T
Sbjct: 115 PICRASAGSRRGSVAIGEESSHLSDTSIDMRGNLTT 150


>ref|XP_003634293.1| PREDICTED: RING-H2 finger protein ATL48-like [Vitis vinifera]
          Length = 146

 Score =  124 bits (310), Expect = 3e-26
 Identities = 61/116 (52%), Positives = 76/116 (65%), Gaps = 3/116 (2%)
 Frame = -2

Query: 665 YRWTFAPVNIVPRRRSTCYNMPSVDLGKLPCYDFKA---EEKDSNPVDCAVCLENLKVGD 495
           +R  +    +V R  S    M   +L KLPC+++KA   E+  ++PVDCAVCLEN + GD
Sbjct: 29  FRRAYGNGAMVQRGGSGGLGMSQDELKKLPCFEYKAVALEKASNSPVDCAVCLENFRKGD 88

Query: 494 RCRLLPRCNHSFHSQCIDSWLLKTPICPICRTSANLKKSCMVSGEGSSHPGEVGFE 327
           +CRLLP C H FHSQCIDSWLLKTPICPICRT A+  K    SG+ S    +VG E
Sbjct: 89  KCRLLPNCKHFFHSQCIDSWLLKTPICPICRTCASTPKISTFSGQESGISRDVGAE 144


>gb|AFK38839.1| unknown [Lotus japonicus]
          Length = 188

 Score =  118 bits (296), Expect = 1e-24
 Identities = 55/90 (61%), Positives = 66/90 (73%), Gaps = 1/90 (1%)
 Frame = -2

Query: 608 NMPSVDLGKLPCYDFKAEEKDS-NPVDCAVCLENLKVGDRCRLLPRCNHSFHSQCIDSWL 432
           +M   DL KLPCYD+ A++  + +PVDCAVCLENL  GD+CRLLP C HSFH+QC+D+WL
Sbjct: 63  SMSKKDLEKLPCYDYVAKDNSTCSPVDCAVCLENLTTGDKCRLLPVCKHSFHAQCVDTWL 122

Query: 431 LKTPICPICRTSANLKKSCMVSGEGSSHPG 342
           LKTPICPICR+SA           GSSH G
Sbjct: 123 LKTPICPICRSSA-----------GSSHSG 141


>ref|XP_002511421.1| conserved hypothetical protein [Ricinus communis]
           gi|223550536|gb|EEF52023.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 189

 Score =  117 bits (293), Expect = 3e-24
 Identities = 55/90 (61%), Positives = 65/90 (72%), Gaps = 1/90 (1%)
 Frame = -2

Query: 593 DLGKLPCYDFKAEEKD-SNPVDCAVCLENLKVGDRCRLLPRCNHSFHSQCIDSWLLKTPI 417
           +L  LPC+D+KA EK+ S+  DC VCLEN  VGD+C+LLP C HSFHSQCIDSWL+KTPI
Sbjct: 60  ELKNLPCFDYKAAEKEGSSSSDCVVCLENFNVGDKCKLLPNCKHSFHSQCIDSWLVKTPI 119

Query: 416 CPICRTSANLKKSCMVSGEGSSHPGEVGFE 327
           CPICRT  N  K  +V  + SS    VG E
Sbjct: 120 CPICRTIVNTPKVGLVLRQESSISIAVGVE 149