BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037813
         (639 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...   146   4e-33
gb|EEC84982.1| hypothetical protein OsI_32248 [Oryza sativa Indi...   140   2e-31
ref|XP_002468588.1| hypothetical protein SORBIDRAFT_01g048580 [S...   136   4e-30
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...   135   5e-30
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...   134   2e-29

>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score =  146 bits (368), Expect = 4e-33
 Identities = 82/212 (38%), Positives = 117/212 (55%)
 Frame = +2

Query: 2    LFIILYEALSRXXXXXXXXXXTYGIKISRKAPSISHMLYADDLIIFGKTLPNEAHNIDKV 181
            LF+I+ E LS            +G+ I+R APS+SH+ YADD ++F      +   +  +
Sbjct: 931  LFLIVAEGLSALIRKAEREQQIHGVAIARGAPSVSHLFYADDSLLFCDATVTDCMALKNI 990

Query: 182  LRLYCDATGQMINRDKSSILFSQGTSLDIQESVKHTLEVAWMTGSDMYLGSPIIFSKSKV 361
               Y  A+GQ IN+DKS+I FS  +   I+E+    L++  +   + YLG P +  K K 
Sbjct: 991  FSTYEAASGQKINKDKSAICFSPKSPAAIKEACSAILDMPVVPCHERYLGLPTVSGKDKK 1050

Query: 362  QDFRFLLDRVRSAVANWQGKLLS*VGRTTLIKTVAQAKPIYTMSVFHIPISITSKMDKAC 541
            + F+ L DRV + V  W+GKLLS  G+  LIKTVAQA P YTMSVF +P   +  ++K  
Sbjct: 1051 KLFQSLPDRVWNRVHGWEGKLLSKAGKEVLIKTVAQAIPNYTMSVFQLPAGTSDAINKCV 1110

Query: 542  RDF*RNSSDSNVIHLCKWSSLCKTKAEGDLGF 637
              F         IH  +WS LC +K +G LGF
Sbjct: 1111 ARFWWGKEGGKGIHWRRWSDLCFSKKDGGLGF 1142


>gb|EEC84982.1| hypothetical protein OsI_32248 [Oryza sativa Indica Group]
           gi|222630794|gb|EEE62926.1| hypothetical protein
           OsJ_17731 [Oryza sativa Japonica Group]
          Length = 893

 Score =  140 bits (354), Expect = 2e-31
 Identities = 74/213 (34%), Positives = 117/213 (54%), Gaps = 1/213 (0%)
 Frame = +2

Query: 2   LFIILYEALSRXXXXXXXXXXTYGIKISRKAPSISHMLYADDLIIFGKTLPNEAHNIDKV 181
           LF+I  E  S             G+K+ ++APS+SH+L+ADD ++  K     A  +  V
Sbjct: 318 LFLICAEGFSSLLYAAEERGDLSGVKVCQQAPSVSHLLFADDSLLLFKVNERSAQCLQNV 377

Query: 182 LRLYCDATGQMINRDKSSILFSQGTSLDIQESVKHTLEVAWMTGSDMYLGSPIIFSKSKV 361
           L LY   +GQ++N+DKSSI+FS+ TS   ++ V   L+++    ++ YLG P+   +S+ 
Sbjct: 378 LNLYESCSGQIVNKDKSSIMFSKNTSQADRKMVMEILDISTEARNEKYLGLPVYMGRSRA 437

Query: 362 QDFRFLLDRVRSAVANWQGKLLS*VGRTTLIKTVAQAKPIYTMSVFHIPISITSKMDK-A 538
           + F +L +RV   +  W+ KLLS  G+  LIK VAQA P + MS F +  ++  ++    
Sbjct: 438 KTFAYLKERVWKKIQGWKEKLLSKAGKDILIKAVAQAIPTFAMSCFDLTKTLCDEISAII 497

Query: 539 CRDF*RNSSDSNVIHLCKWSSLCKTKAEGDLGF 637
           CR F       N +H   W  LC+ K +G LG+
Sbjct: 498 CRYFWSQQETENKMHWLSWDLLCRRKKKGGLGY 530


>ref|XP_002468588.1| hypothetical protein SORBIDRAFT_01g048580 [Sorghum bicolor]
           gi|241922442|gb|EER95586.1| hypothetical protein
           SORBIDRAFT_01g048580 [Sorghum bicolor]
          Length = 517

 Score =  136 bits (342), Expect = 4e-30
 Identities = 77/213 (36%), Positives = 113/213 (53%), Gaps = 1/213 (0%)
 Frame = +2

Query: 2   LFIILYEALSRXXXXXXXXXXTYGIKISRKAPSISHMLYADDLIIFGKTLPNEAHNIDKV 181
           LFI+  E LS             GIKI R AP ++H+ +ADD ++  +    +AH +  +
Sbjct: 67  LFILCAEGLSAMLQSAENAGKIEGIKICRGAPRVNHLFFADDSLMLMRARKEDAHELKHI 126

Query: 182 LRLYCDATGQMINRDKSSILFSQGTSLDIQESVKHTLEVAWMTGSDMYLGSPIIFSKSKV 361
           L +Y  A+GQ+IN+DKSSI+FS  TS   +  ++  L +     S+ YLG PI   KS+ 
Sbjct: 127 LEIYERASGQVINKDKSSIMFSPNTSDYFKGKMRKELSIMQEARSEKYLGGPISTGKSRK 186

Query: 362 QDFRFLLDRVRSAVANWQGKLLS*VGRTTLIKTVAQAKPIYTMSVFHIPISITSKMDKAC 541
           + F ++  R+ + +  WQ KLLS  G+  LIK VAQA P Y MS F++  S    +    
Sbjct: 187 KAFEYIKQRIWARIQGWQEKLLSKAGKEILIKAVAQAIPTYAMSYFNLTKSFCDDLSSMV 246

Query: 542 RDF*RNSSD-SNVIHLCKWSSLCKTKAEGDLGF 637
             +  +  D +N IH   W  L  +K  G LGF
Sbjct: 247 GRYWWSEQDKTNKIHWLSWEKLTLSKKRGGLGF 279


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score =  135 bits (341), Expect = 5e-30
 Identities = 79/213 (37%), Positives = 115/213 (53%), Gaps = 1/213 (0%)
 Frame = +2

Query: 2    LFIILYEALSRXXXXXXXXXXTYGIKISRKAPSISHMLYADDLIIFGKTLPNEAHNIDKV 181
            LFI++ +A S+           +G K SR  P ISH+ +AD  ++F +    E   I ++
Sbjct: 647  LFILIADAFSKMIQKKVQEKQLHGAKASRSGPVISHLFFADVSLLFTRASRQECAIIVEI 706

Query: 182  LRLYCDATGQMINRDKSSILFSQGTSLDIQESVKHTLEVAWMTGSDMYLGSPIIFSKSKV 361
            L LY  A+GQ IN DKS + FS+G S+  +E + + L++  +     YLG P I  +S+ 
Sbjct: 707  LNLYEQASGQKINYDKSEVSFSKGVSIAQKEELSNILQMKQVERHMKYLGIPSITGRSRT 766

Query: 362  QDFRFLLDRVRSAVANWQGKLLS*VGRTTLIKTVAQAKPIYTMSVFHIPISITSKMDKAC 541
              F  L+DR+   +  W+ KLLS  G+  L+K+V QA P Y M V+ +P SI  K+  A 
Sbjct: 767  AIFDSLMDRIWKKLQGWKEKLLSRAGKEILLKSVIQAIPTYLMGVYKLPCSIIQKIHSAM 826

Query: 542  RDF*RNSSDS-NVIHLCKWSSLCKTKAEGDLGF 637
              F   SSD+   IH   W SLC  K  G +GF
Sbjct: 827  ARFWWGSSDTQRRIHWKNWDSLCTLKCFGGMGF 859


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score =  134 bits (336), Expect = 2e-29
 Identities = 75/213 (35%), Positives = 112/213 (52%), Gaps = 1/213 (0%)
 Frame = +2

Query: 2    LFIILYEALSRXXXXXXXXXXTYGIKISRKAPSISHMLYADDLIIFGKTLPNEAHNIDKV 181
            LFI++ +A S+           +G K SR  P ISH+L+ADD ++F +    E   I  +
Sbjct: 650  LFILVADAFSQMVKQKVVSKEIHGAKASRNGPEISHLLFADDSLLFTRATRQECLTIVDI 709

Query: 182  LRLYCDATGQMINRDKSSILFSQGTSLDIQESVKHTLEVAWMTGSDMYLGSPIIFSKSKV 361
            L  Y  A+GQ IN +KS + FS+G S + +E +   L +  +     YLG P +  +SK 
Sbjct: 710  LNKYEAASGQKINYEKSEVSFSRGVSCEKKEELITLLHMRQVDRHQKYLGIPALCGRSKK 769

Query: 362  QDFRFLLDRVRSAVANWQGKLLS*VGRTTLIKTVAQAKPIYTMSVFHIPISITSKMDKA- 538
              FR LLDR+   +  W+ KLLS  G+  LIK V QA P Y M V+ +P+++  ++  A 
Sbjct: 770  VLFRELLDRMWKKLRGWKEKLLSRAGKEVLIKAVIQALPTYLMGVYKLPVAVIQEIHSAM 829

Query: 539  CRDF*RNSSDSNVIHLCKWSSLCKTKAEGDLGF 637
             R +     D   +H   W  +CK K  G +GF
Sbjct: 830  ARFWWGGKGDERKMHWLSWEKMCKPKCMGGMGF 862