BLASTX nr result

ID: Coptis23_contig00037811 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037811
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADL63849.1| ribosomal protein S3 [Eupomatia bennettii]             144   1e-32
gb|ADL63797.1| ribosomal protein S3 [Celtis yunnanensis]              144   1e-32
gb|ADL63790.1| ribosomal protein S3 [Cannabis sativa]                 144   1e-32
gb|ADL63898.1| ribosomal protein S3 [Lardizabala biternata]           143   1e-32
gb|ADL63928.1| ribosomal protein S3 [Nelumbo nucifera]                142   3e-32

>gb|ADL63849.1| ribosomal protein S3 [Eupomatia bennettii]
          Length = 454

 Score =  144 bits (362), Expect = 1e-32
 Identities = 73/80 (91%), Positives = 74/80 (92%)
 Frame = -2

Query: 242 RGAGKRVESIRLDDREKQNEIRIWPKKKQRYGYHDRSPSRKKNLSKSLRVSRALKHPKYA 63
           RGAGKRVESIRLDDREKQNEIRIWPKKKQRYGYHDRSPSRKKNLSKSLRVS A KHPKYA
Sbjct: 31  RGAGKRVESIRLDDREKQNEIRIWPKKKQRYGYHDRSPSRKKNLSKSLRVSGAFKHPKYA 90

Query: 62  GVVNNKRAAFLIENYDSFRK 3
           GVVN+   AFLIEN DSFRK
Sbjct: 91  GVVND--IAFLIENDDSFRK 108


>gb|ADL63797.1| ribosomal protein S3 [Celtis yunnanensis]
          Length = 488

 Score =  144 bits (362), Expect = 1e-32
 Identities = 73/80 (91%), Positives = 75/80 (93%)
 Frame = -2

Query: 242 RGAGKRVESIRLDDREKQNEIRIWPKKKQRYGYHDRSPSRKKNLSKSLRVSRALKHPKYA 63
           RGAGKRVESIRLDDREKQNEIRIWPKKKQRYGYHDRSPS KKNLSKSLRVSRA+KHPKYA
Sbjct: 69  RGAGKRVESIRLDDREKQNEIRIWPKKKQRYGYHDRSPSIKKNLSKSLRVSRAVKHPKYA 128

Query: 62  GVVNNKRAAFLIENYDSFRK 3
           GVVN+   AFLIEN DSFRK
Sbjct: 129 GVVND--IAFLIENDDSFRK 146


>gb|ADL63790.1| ribosomal protein S3 [Cannabis sativa]
          Length = 494

 Score =  144 bits (362), Expect = 1e-32
 Identities = 73/80 (91%), Positives = 75/80 (93%)
 Frame = -2

Query: 242 RGAGKRVESIRLDDREKQNEIRIWPKKKQRYGYHDRSPSRKKNLSKSLRVSRALKHPKYA 63
           RGAGKRVESIRLDDREKQNEIRIWPKKKQRYGYHDRSPS KKNLSKSLRVSRA+KHPKYA
Sbjct: 71  RGAGKRVESIRLDDREKQNEIRIWPKKKQRYGYHDRSPSIKKNLSKSLRVSRAVKHPKYA 130

Query: 62  GVVNNKRAAFLIENYDSFRK 3
           GVVN+   AFLIEN DSFRK
Sbjct: 131 GVVND--IAFLIENDDSFRK 148


>gb|ADL63898.1| ribosomal protein S3 [Lardizabala biternata]
          Length = 478

 Score =  143 bits (361), Expect = 1e-32
 Identities = 73/79 (92%), Positives = 74/79 (93%)
 Frame = -2

Query: 239 GAGKRVESIRLDDREKQNEIRIWPKKKQRYGYHDRSPSRKKNLSKSLRVSRALKHPKYAG 60
           GAGKRVESIRLDDREKQNEIRIWPKKKQRYGYHDRSPSRKKNLSKSLRVS ALKHPKYAG
Sbjct: 57  GAGKRVESIRLDDREKQNEIRIWPKKKQRYGYHDRSPSRKKNLSKSLRVSGALKHPKYAG 116

Query: 59  VVNNKRAAFLIENYDSFRK 3
           VVN+   AFLIEN DSFRK
Sbjct: 117 VVND--IAFLIENDDSFRK 133


>gb|ADL63928.1| ribosomal protein S3 [Nelumbo nucifera]
          Length = 483

 Score =  142 bits (358), Expect = 3e-32
 Identities = 72/80 (90%), Positives = 74/80 (92%)
 Frame = -2

Query: 242 RGAGKRVESIRLDDREKQNEIRIWPKKKQRYGYHDRSPSRKKNLSKSLRVSRALKHPKYA 63
           RGAGKRVESIRLDDREKQNEIRIWP+KKQRYGYHDRSPSRKKNLSKSLRVS A KHPKYA
Sbjct: 61  RGAGKRVESIRLDDREKQNEIRIWPQKKQRYGYHDRSPSRKKNLSKSLRVSGAFKHPKYA 120

Query: 62  GVVNNKRAAFLIENYDSFRK 3
           GVVN+   AFLIEN DSFRK
Sbjct: 121 GVVND--IAFLIENDDSFRK 138


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