BLASTX nr result

ID: Coptis23_contig00037806 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037806
         (506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266325.2| PREDICTED: PAN domain-containing protein At5...   184   5e-45
ref|XP_002531315.1| sugar binding protein, putative [Ricinus com...   181   7e-44
ref|XP_002323053.1| predicted protein [Populus trichocarpa] gi|2...   171   7e-41
ref|XP_003551596.1| PREDICTED: PAN domain-containing protein At5...   170   1e-40
ref|XP_003533669.1| PREDICTED: PAN domain-containing protein At5...   169   2e-40

>ref|XP_002266325.2| PREDICTED: PAN domain-containing protein At5g03700-like [Vitis
           vinifera] gi|297735574|emb|CBI18068.3| unnamed protein
           product [Vitis vinifera]
          Length = 465

 Score =  184 bits (468), Expect = 5e-45
 Identities = 89/151 (58%), Positives = 111/151 (73%)
 Frame = -1

Query: 455 YMDLYMIGFMFYFFTCGFCKSDIPIGYQVTLPVPSMYNVTFSGRAFFMETGNEVPTFKVA 276
           ++ L+++G + + F  G CKSD+P   QV L VP  Y+V F GRAF ME    VP+F+ A
Sbjct: 4   FLFLFLLGVLIHLFAHGSCKSDLPAPSQVMLAVPVGYSVGFKGRAFLMEANQMVPSFRAA 63

Query: 275 LSVEAVNGEYSCSLGVFLGDFKVWNSGHFSQFVAREICMLELTKYGDLQLKDSKGGIGWR 96
           LSVEA+NG+Y+CSLGVFLGD KVW+SGH ++F   E C LELT  GDLQLK +K  +GWR
Sbjct: 64  LSVEAINGKYACSLGVFLGDVKVWDSGHSTRFYTSERCALELTTDGDLQLKGAKEQVGWR 123

Query: 95  SATSAQSVERLQLLETGNLVLSDAMNQIKWQ 3
           +AT  Q VERLQL  TGNLVL DA+N+IKWQ
Sbjct: 124 TATFGQGVERLQLSRTGNLVLVDALNRIKWQ 154


>ref|XP_002531315.1| sugar binding protein, putative [Ricinus communis]
           gi|223529083|gb|EEF31065.1| sugar binding protein,
           putative [Ricinus communis]
          Length = 473

 Score =  181 bits (458), Expect = 7e-44
 Identities = 90/152 (59%), Positives = 110/152 (72%), Gaps = 2/152 (1%)
 Frame = -1

Query: 452 MDLYMIGFMFYF--FTCGFCKSDIPIGYQVTLPVPSMYNVTFSGRAFFMETGNEVPTFKV 279
           M+  ++GF+ +F  F    CKSDI IG++VTL VP  Y++   GRAF MET    P FKV
Sbjct: 1   MEFSLLGFLLFFVLFAHALCKSDIHIGHRVTLAVPVEYSLGIIGRAFLMETYQSEPKFKV 60

Query: 278 ALSVEAVNGEYSCSLGVFLGDFKVWNSGHFSQFVAREICMLELTKYGDLQLKDSKGGIGW 99
           ALSV  +NG+YSCSL VFLGD KVWNSGH+S F   + C+LELTK GDLQLK  K  +GW
Sbjct: 61  ALSVVPINGKYSCSLEVFLGDVKVWNSGHYSPFFTSDTCVLELTKEGDLQLKGPKELVGW 120

Query: 98  RSATSAQSVERLQLLETGNLVLSDAMNQIKWQ 3
           R+ TS Q VERLQ+L +GNLVL D +N+IKWQ
Sbjct: 121 RTGTSGQGVERLQILGSGNLVLVDNLNRIKWQ 152


>ref|XP_002323053.1| predicted protein [Populus trichocarpa] gi|222867683|gb|EEF04814.1|
           predicted protein [Populus trichocarpa]
          Length = 465

 Score =  171 bits (432), Expect = 7e-41
 Identities = 83/134 (61%), Positives = 99/134 (73%)
 Frame = -1

Query: 404 FCKSDIPIGYQVTLPVPSMYNVTFSGRAFFMETGNEVPTFKVALSVEAVNGEYSCSLGVF 225
           +CK+ I I Y +T+ VPS Y+V   GRAF MET    P F+VALSVE + G+YSCSL VF
Sbjct: 18  YCKTYIHIDYSLTVEVPSEYSVELLGRAFLMETDQMEPDFRVALSVEPIRGKYSCSLEVF 77

Query: 224 LGDFKVWNSGHFSQFVAREICMLELTKYGDLQLKDSKGGIGWRSATSAQSVERLQLLETG 45
           LGD KVWNSGH+S F   + C+L LTK GDL LK S   IGWR+ TS Q VERLQ+L+TG
Sbjct: 78  LGDVKVWNSGHYSHFYTSDTCVLALTKDGDLHLKGSNDRIGWRTGTSGQGVERLQILKTG 137

Query: 44  NLVLSDAMNQIKWQ 3
           NLVL DA+N+IKWQ
Sbjct: 138 NLVLVDALNRIKWQ 151


>ref|XP_003551596.1| PREDICTED: PAN domain-containing protein At5g03700-like [Glycine
           max]
          Length = 464

 Score =  170 bits (430), Expect = 1e-40
 Identities = 82/155 (52%), Positives = 109/155 (70%)
 Frame = -1

Query: 467 RSFSYMDLYMIGFMFYFFTCGFCKSDIPIGYQVTLPVPSMYNVTFSGRAFFMETGNEVPT 288
           R F ++ L ++  +F +   GF +S +  GYQ+ + VP  Y V F GRAF +ET    P 
Sbjct: 2   RLFPFLLLLLLVLLFNY---GFSESGVGAGYQLMVAVPVEYEVDFKGRAFLVETNQTAPN 58

Query: 287 FKVALSVEAVNGEYSCSLGVFLGDFKVWNSGHFSQFVAREICMLELTKYGDLQLKDSKGG 108
           F+VALS+EA+NG+YSCSL VFLGD KVW+SGH+S+F   E C+LELT  GDL+LK  K  
Sbjct: 59  FRVALSIEAINGKYSCSLEVFLGDVKVWDSGHYSRFYITEKCLLELTMDGDLRLKGPKER 118

Query: 107 IGWRSATSAQSVERLQLLETGNLVLSDAMNQIKWQ 3
           +GW++ TS Q V+RL++  TGNLVL DA+N IKWQ
Sbjct: 119 VGWKTGTSGQGVKRLEIQRTGNLVLIDALNNIKWQ 153


>ref|XP_003533669.1| PREDICTED: PAN domain-containing protein At5g03700-like [Glycine
           max]
          Length = 463

 Score =  169 bits (429), Expect = 2e-40
 Identities = 82/155 (52%), Positives = 107/155 (69%)
 Frame = -1

Query: 467 RSFSYMDLYMIGFMFYFFTCGFCKSDIPIGYQVTLPVPSMYNVTFSGRAFFMETGNEVPT 288
           R F ++ L ++      F  GF +S +  GYQ+ + VP  Y V F GRAF +ET    P 
Sbjct: 2   RLFPFLFLLLV----LLFNYGFSESGVGAGYQLMVAVPVEYEVNFKGRAFLVETNQTAPN 57

Query: 287 FKVALSVEAVNGEYSCSLGVFLGDFKVWNSGHFSQFVAREICMLELTKYGDLQLKDSKGG 108
           F+VALS+EA+NG+YSCSL VFLGD KVW+SGH+S+F   E C+LELT  GDL+LK  K  
Sbjct: 58  FRVALSIEAINGKYSCSLEVFLGDVKVWDSGHYSRFYITEKCLLELTMDGDLRLKGPKER 117

Query: 107 IGWRSATSAQSVERLQLLETGNLVLSDAMNQIKWQ 3
           +GW++ TS Q V+RL++  TGNLVL DA+N IKWQ
Sbjct: 118 VGWKTGTSGQGVKRLEIQRTGNLVLVDALNNIKWQ 152


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