BLASTX nr result

ID: Coptis23_contig00037786 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037786
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_190354.1| RINT-1 / TIP-1 domain-containing MAG2 protein [...    77   1e-12
gb|AAM13172.1| putative protein [Arabidopsis thaliana]                 77   1e-12
ref|XP_002877572.1| hypothetical protein ARALYDRAFT_485134 [Arab...    76   2e-12
emb|CBI15247.3| unnamed protein product [Vitis vinifera]               72   5e-11
ref|XP_002268222.1| PREDICTED: RINT1-like protein-like [Vitis vi...    72   5e-11

>ref|NP_190354.1| RINT-1 / TIP-1 domain-containing MAG2 protein [Arabidopsis
           thaliana] gi|4741187|emb|CAB41853.1| putative protein
           [Arabidopsis thaliana] gi|332644799|gb|AEE78320.1|
           RINT-1 / TIP-1 domain-containing MAG2 protein
           [Arabidopsis thaliana]
          Length = 795

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 44/99 (44%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
 Frame = +2

Query: 8   AIDTIPQ--NLSNSLHSFLEQNFQTKNDILNSSNLVPELQKQCQELDQSLNNLNHKLDKS 181
           AI  +PQ  + S S+ SFL+  F+   D+ +S+ LV ELQ +  ELDQ L  LN +L+  
Sbjct: 3   AIKPLPQVSSFSASVFSFLDGRFKESTDLSHSTGLVSELQTEISELDQRLAGLNRQLESG 62

Query: 182 LFTYASHSEQIGGLFHVIQLKLNHLKSSTRVSVSNPDDG 298
           L  YAS S+++GGLF  +  KL  L SST V+ S  D G
Sbjct: 63  LAAYASFSDRVGGLFFEVNAKLADLSSSTSVTRSASDSG 101


>gb|AAM13172.1| putative protein [Arabidopsis thaliana]
          Length = 795

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 44/99 (44%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
 Frame = +2

Query: 8   AIDTIPQ--NLSNSLHSFLEQNFQTKNDILNSSNLVPELQKQCQELDQSLNNLNHKLDKS 181
           AI  +PQ  + S S+ SFL+  F+   D+ +S+ LV ELQ +  ELDQ L  LN +L+  
Sbjct: 3   AIKPLPQVSSFSASVFSFLDGRFKESTDLSHSTGLVSELQTEISELDQRLAGLNRQLESG 62

Query: 182 LFTYASHSEQIGGLFHVIQLKLNHLKSSTRVSVSNPDDG 298
           L  YAS S+++GGLF  +  KL  L SST V+ S  D G
Sbjct: 63  LAAYASFSDRVGGLFFEVNAKLADLSSSTSVTRSASDSG 101


>ref|XP_002877572.1| hypothetical protein ARALYDRAFT_485134 [Arabidopsis lyrata subsp.
           lyrata] gi|297323410|gb|EFH53831.1| hypothetical protein
           ARALYDRAFT_485134 [Arabidopsis lyrata subsp. lyrata]
          Length = 782

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 44/99 (44%), Positives = 59/99 (59%), Gaps = 2/99 (2%)
 Frame = +2

Query: 8   AIDTIPQ--NLSNSLHSFLEQNFQTKNDILNSSNLVPELQKQCQELDQSLNNLNHKLDKS 181
           AI  +PQ  + S S+ SFL+  F+   D+  S  LV ELQ +  ELDQ L  LN +L+  
Sbjct: 3   AIKPLPQVSSFSASVFSFLDDKFRDSTDLSQSPGLVSELQTEISELDQRLAGLNRQLESG 62

Query: 182 LFTYASHSEQIGGLFHVIQLKLNHLKSSTRVSVSNPDDG 298
           L +YAS S+++GGLF  +  KL +L SST V  S  D G
Sbjct: 63  LASYASFSDRVGGLFVEVNAKLANLSSSTSVPRSASDGG 101


>emb|CBI15247.3| unnamed protein product [Vitis vinifera]
          Length = 606

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 43/101 (42%), Positives = 62/101 (61%), Gaps = 2/101 (1%)
 Frame = +2

Query: 11  IDTIPQ--NLSNSLHSFLEQNFQTKNDILNSSNLVPELQKQCQELDQSLNNLNHKLDKSL 184
           I ++P   +LS S  SFL + F  K D++ +++LV ELQK+C +LDQ+L +LN  L+ +L
Sbjct: 4   IQSLPSLSSLSASTVSFLNKEFHRKEDLIRATHLVSELQKRCGDLDQNLIDLNRTLEATL 63

Query: 185 FTYASHSEQIGGLFHVIQLKLNHLKSSTRVSVSNPDDGVGR 307
             YA HS  +  LF  I L+L  L S+T  S S+   G GR
Sbjct: 64  LAYAFHSNGLHDLFRNINLQLTRLNSTTCFS-SDGGGGEGR 103


>ref|XP_002268222.1| PREDICTED: RINT1-like protein-like [Vitis vinifera]
          Length = 800

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 43/101 (42%), Positives = 62/101 (61%), Gaps = 2/101 (1%)
 Frame = +2

Query: 11  IDTIPQ--NLSNSLHSFLEQNFQTKNDILNSSNLVPELQKQCQELDQSLNNLNHKLDKSL 184
           I ++P   +LS S  SFL + F  K D++ +++LV ELQK+C +LDQ+L +LN  L+ +L
Sbjct: 4   IQSLPSLSSLSASTVSFLNKEFHRKEDLIRATHLVSELQKRCGDLDQNLIDLNRTLEATL 63

Query: 185 FTYASHSEQIGGLFHVIQLKLNHLKSSTRVSVSNPDDGVGR 307
             YA HS  +  LF  I L+L  L S+T  S S+   G GR
Sbjct: 64  LAYAFHSNGLHDLFRNINLQLTRLNSTTCFS-SDGGGGEGR 103


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