BLASTX nr result

ID: Coptis23_contig00037772 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037772
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34319.3| unnamed protein product [Vitis vinifera]               78   8e-13
ref|XP_002512308.1| conserved hypothetical protein [Ricinus comm...    69   5e-10
gb|AAB61082.1| contains similarity to Synechococcus PCC7942 chro...    68   7e-10
ref|NP_001031951.1| putative stress regulated protein [Arabidops...    68   7e-10
ref|NP_568492.1| putative stress regulated protein [Arabidopsis ...    68   7e-10

>emb|CBI34319.3| unnamed protein product [Vitis vinifera]
          Length = 340

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 41/84 (48%), Positives = 55/84 (65%), Gaps = 4/84 (4%)
 Frame = +1

Query: 73  EMSFVIHQNGMGLNFRQEFQMNTSMVCSSR----GETSLRRRVLRKVDNELARGNSKGAL 240
           +M+F +HQ G+  +  +     T  + S+     G  + RRR L+ VD EL++GN K A+
Sbjct: 28  QMNFAVHQGGLCSSHLRRIFPVTGAIASAEHKDAGNAARRRRSLKMVDRELSKGNYKTAV 87

Query: 241 SLVKQLQGKPGGLRGFGAAKQVPY 312
           SLVKQL GKPGGLRGFGAAKQV +
Sbjct: 88  SLVKQLNGKPGGLRGFGAAKQVSH 111


>ref|XP_002512308.1| conserved hypothetical protein [Ricinus communis]
           gi|223548269|gb|EEF49760.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 287

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 39/74 (52%), Positives = 50/74 (67%), Gaps = 5/74 (6%)
 Frame = +1

Query: 103 MGLNFRQEFQMNTSMVCS----SRGETSLRRRV-LRKVDNELARGNSKGALSLVKQLQGK 267
           M L F    + +T+ + S       + ++RRR  L++VD EL++GN K ALSLV QLQGK
Sbjct: 1   MNLTFELRLEPSTTGIISPGKLKEADYAIRRRKSLQRVDRELSKGNFKDALSLVNQLQGK 60

Query: 268 PGGLRGFGAAKQVP 309
           P GLRGFGAAKQVP
Sbjct: 61  PFGLRGFGAAKQVP 74


>gb|AAB61082.1| contains similarity to Synechococcus PCC7942 chromosomal region
           used as basis of neutral siteII recombinational cloning
           vector (PID:g1174192) [Arabidopsis thaliana]
          Length = 386

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 33/55 (60%), Positives = 43/55 (78%)
 Frame = +1

Query: 145 MVCSSRGETSLRRRVLRKVDNELARGNSKGALSLVKQLQGKPGGLRGFGAAKQVP 309
           +VCSS    S+RR+ L +VD++L+ G+ + ALSLVK LQGKP GLR FGAA+QVP
Sbjct: 31  IVCSSETGLSIRRQALEQVDSKLSSGDERAALSLVKDLQGKPDGLRCFGAARQVP 85


>ref|NP_001031951.1| putative stress regulated protein [Arabidopsis thaliana]
           gi|332006285|gb|AED93668.1| putative stress regulated
           protein [Arabidopsis thaliana]
          Length = 262

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 33/55 (60%), Positives = 43/55 (78%)
 Frame = +1

Query: 145 MVCSSRGETSLRRRVLRKVDNELARGNSKGALSLVKQLQGKPGGLRGFGAAKQVP 309
           +VCSS    S+RR+ L +VD++L+ G+ + ALSLVK LQGKP GLR FGAA+QVP
Sbjct: 31  IVCSSETGLSIRRQALEQVDSKLSSGDERAALSLVKDLQGKPDGLRCFGAARQVP 85


>ref|NP_568492.1| putative stress regulated protein [Arabidopsis thaliana]
           gi|115311399|gb|ABI93880.1| At5g27290 [Arabidopsis
           thaliana] gi|332006284|gb|AED93667.1| putative stress
           regulated protein [Arabidopsis thaliana]
          Length = 341

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 33/55 (60%), Positives = 43/55 (78%)
 Frame = +1

Query: 145 MVCSSRGETSLRRRVLRKVDNELARGNSKGALSLVKQLQGKPGGLRGFGAAKQVP 309
           +VCSS    S+RR+ L +VD++L+ G+ + ALSLVK LQGKP GLR FGAA+QVP
Sbjct: 31  IVCSSETGLSIRRQALEQVDSKLSSGDERAALSLVKDLQGKPDGLRCFGAARQVP 85


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