BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037761
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containi...   156   2e-36
ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containi...   155   2e-36
ref|XP_004168473.1| PREDICTED: pentatricopeptide repeat-containi...   137   1e-30
ref|XP_004135799.1| PREDICTED: pentatricopeptide repeat-containi...   137   1e-30
ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea ma...   116   2e-24

>ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 821

 Score =  156 bits (394), Expect = 2e-36
 Identities = 71/120 (59%), Positives = 99/120 (82%)
 Frame = +2

Query: 77  TMASLRQGCAQLSSVDNGKVLHCCVLRRHLESNVIVSTAIVDLYAKSGAVKLARSVFSAM 256
           T+ SL +GC+Q S ++NG++LH C++R+ LES++++STAIVD+Y+K GA+K A  VF  M
Sbjct: 349 TLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRM 408

Query: 257 KEKNVISWTAMLMGLAQNGHAEEAFKIFGQMQEEGVDVNAFTLVSLIHACAHVGSLKKGQ 436
            +KNVI+WTAML+GL+QNG+AE+A K+F QMQEE V  N+ TLVSL+H CAH+GSL KG+
Sbjct: 409 GKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGR 468



 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 42/120 (35%), Positives = 67/120 (55%)
 Frame = +2

Query: 77  TMASLRQGCAQLSSVDNGKVLHCCVLRRHLESNVIVSTAIVDLYAKSGAVKLARSVFSAM 256
           TMA+L + C Q      G   H  VL   + ++V V T++VD+Y+  G    A  VF +M
Sbjct: 248 TMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSM 307

Query: 257 KEKNVISWTAMLMGLAQNGHAEEAFKIFGQMQEEGVDVNAFTLVSLIHACAHVGSLKKGQ 436
             +++ISW AM+ G  QNG   E++ +F ++ + G   ++ TLVSLI  C+    L+ G+
Sbjct: 308 CSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGR 367



 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 40/121 (33%), Positives = 70/121 (57%), Gaps = 1/121 (0%)
 Frame = +2

Query: 77  TMASLRQGCAQLSSVDNGKVLHCCVLRRHLESNVIVSTAIVDLYAKSGAVKLARSVFS-A 253
           T+ SL   CA L S+  G+ +H   +R     + ++++A++D+YAK G +  A  +F+  
Sbjct: 450 TLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNE 509

Query: 254 MKEKNVISWTAMLMGLAQNGHAEEAFKIFGQMQEEGVDVNAFTLVSLIHACAHVGSLKKG 433
              K+VI   +M+MG   +GH   A  ++ +M EE +  N  T VSL+ AC+H G +++G
Sbjct: 510 FHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEG 569

Query: 434 Q 436
           +
Sbjct: 570 K 570


>ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 805

 Score =  155 bits (393), Expect = 2e-36
 Identities = 73/120 (60%), Positives = 99/120 (82%)
 Frame = +2

Query: 77  TMASLRQGCAQLSSVDNGKVLHCCVLRRHLESNVIVSTAIVDLYAKSGAVKLARSVFSAM 256
           T+ SL QGC+Q +S+  GK+LH C +R   ESN+I+STAIVDLY+K G++K A  VF+ M
Sbjct: 334 TIVSLLQGCSQTASLATGKILHGCAIRS-FESNLILSTAIVDLYSKCGSLKQATFVFNRM 392

Query: 257 KEKNVISWTAMLMGLAQNGHAEEAFKIFGQMQEEGVDVNAFTLVSLIHACAHVGSLKKGQ 436
           K++NVI+WTAML+GLAQNGHAE+A ++F QMQEEG+  N+ T VSL+H+CAH+GSLK+G+
Sbjct: 393 KDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGR 452



 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 43/120 (35%), Positives = 70/120 (58%)
 Frame = +2

Query: 77  TMASLRQGCAQLSSVDNGKVLHCCVLRRHLESNVIVSTAIVDLYAKSGAVKLARSVFSAM 256
           TM SL Q C  + ++  GK +H  VL   L ++++V T+ VD+Y+K G ++ AR VF  M
Sbjct: 233 TMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKM 292

Query: 257 KEKNVISWTAMLMGLAQNGHAEEAFKIFGQMQEEGVDVNAFTLVSLIHACAHVGSLKKGQ 436
             +N++SW AM+ G  +NG   E+F +F ++       +  T+VSL+  C+   SL  G+
Sbjct: 293 PTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGK 352



 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 43/120 (35%), Positives = 69/120 (57%), Gaps = 1/120 (0%)
 Frame = +2

Query: 77  TMASLRQGCAQLSSVDNGKVLHCCVLRRHLESNVIVSTAIVDLYAKSGAVKLARSVFS-A 253
           T  SL   CA L S+  G+ +H  + R     +++  TA+VD+YAK G + LA  +FS  
Sbjct: 434 TFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHG 493

Query: 254 MKEKNVISWTAMLMGLAQNGHAEEAFKIFGQMQEEGVDVNAFTLVSLIHACAHVGSLKKG 433
              K+V+ W +M+ G   +GH  +A  I+ +M EEG+  N  T +SL+ AC+H   +++G
Sbjct: 494 SISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQG 553



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 33/114 (28%), Positives = 60/114 (52%)
 Frame = +2

Query: 95  QGCAQLSSVDNGKVLHCCVLRRHLESNVIVSTAIVDLYAKSGAVKLARSVFSAMKEKNVI 274
           + CA     + G  +    + + +E N  V ++++    K G +  A+ VF  M  K+V+
Sbjct: 138 KACASSLDYEMGMEIISSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVV 197

Query: 275 SWTAMLMGLAQNGHAEEAFKIFGQMQEEGVDVNAFTLVSLIHACAHVGSLKKGQ 436
            W +++ G  Q G  + AF++F +M   G+  +  T+ SLI AC  +G+LK G+
Sbjct: 198 CWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGK 251


>ref|XP_004168473.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like, partial [Cucumis sativus]
          Length = 670

 Score =  137 bits (344), Expect = 1e-30
 Identities = 67/120 (55%), Positives = 89/120 (74%)
 Frame = +2

Query: 77  TMASLRQGCAQLSSVDNGKVLHCCVLRRHLESNVIVSTAIVDLYAKSGAVKLARSVFSAM 256
           T+ SL Q C++ + +D GK+LH  + RR L+ N+++ TAIVDLYAK G++  A SVF  M
Sbjct: 326 TVVSLIQLCSRTADLDGGKILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERM 385

Query: 257 KEKNVISWTAMLMGLAQNGHAEEAFKIFGQMQEEGVDVNAFTLVSLIHACAHVGSLKKGQ 436
           K KNVISWTAML+GLAQNGHA +A K+F QMQ E V  NA TLVSL++ C  +G L++G+
Sbjct: 386 KNKNVISWTAMLVGLAQNGHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGR 445



 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 42/120 (35%), Positives = 68/120 (56%)
 Frame = +2

Query: 77  TMASLRQGCAQLSSVDNGKVLHCCVLRRHLESNVIVSTAIVDLYAKSGAVKLARSVFSAM 256
           TM SL Q C ++ ++  GK +H  VL   +  +  V T ++D+Y KSG V+ AR +F  M
Sbjct: 225 TMISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESARWIFENM 284

Query: 257 KEKNVISWTAMLMGLAQNGHAEEAFKIFGQMQEEGVDVNAFTLVSLIHACAHVGSLKKGQ 436
             +N++SW  M+ G  QNG   E  ++F ++  + V  ++ T+VSLI  C+    L  G+
Sbjct: 285 PSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGGK 344



 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 41/120 (34%), Positives = 67/120 (55%), Gaps = 1/120 (0%)
 Frame = +2

Query: 77  TMASLRQGCAQLSSVDNGKVLHCCVLRRHLESNVIVSTAIVDLYAKSGAVKLARSVFS-A 253
           T+ SL   C  L  +  G+ +H  + R H  S V+V TA++D+YAK   +  A  VF   
Sbjct: 427 TLVSLVYCCTLLGLLREGRSVHATLTRFHFASEVVVMTALIDMYAKCSKINSAEMVFKYG 486

Query: 254 MKEKNVISWTAMLMGLAQNGHAEEAFKIFGQMQEEGVDVNAFTLVSLIHACAHVGSLKKG 433
           +  K+VI + +M+ G   +G   +A  ++ +M  EG+  N  T VSL+ AC+H G +++G
Sbjct: 487 LTPKDVILYNSMISGYGMHGLGHKALCVYHRMNREGLQPNESTFVSLLSACSHSGLVEEG 546


>ref|XP_004135799.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 706

 Score =  137 bits (344), Expect = 1e-30
 Identities = 67/120 (55%), Positives = 89/120 (74%)
 Frame = +2

Query: 77  TMASLRQGCAQLSSVDNGKVLHCCVLRRHLESNVIVSTAIVDLYAKSGAVKLARSVFSAM 256
           T+ SL Q C++ + +D GK+LH  + RR L+ N+++ TAIVDLYAK G++  A SVF  M
Sbjct: 359 TVVSLIQLCSRTADLDGGKILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERM 418

Query: 257 KEKNVISWTAMLMGLAQNGHAEEAFKIFGQMQEEGVDVNAFTLVSLIHACAHVGSLKKGQ 436
           K KNVISWTAML+GLAQNGHA +A K+F QMQ E V  NA TLVSL++ C  +G L++G+
Sbjct: 419 KNKNVISWTAMLVGLAQNGHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGR 478



 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 42/120 (35%), Positives = 68/120 (56%)
 Frame = +2

Query: 77  TMASLRQGCAQLSSVDNGKVLHCCVLRRHLESNVIVSTAIVDLYAKSGAVKLARSVFSAM 256
           TM SL Q C ++ ++  GK +H  VL   +  +  V T ++D+Y KSG V+ AR +F  M
Sbjct: 258 TMISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESARWIFENM 317

Query: 257 KEKNVISWTAMLMGLAQNGHAEEAFKIFGQMQEEGVDVNAFTLVSLIHACAHVGSLKKGQ 436
             +N++SW  M+ G  QNG   E  ++F ++  + V  ++ T+VSLI  C+    L  G+
Sbjct: 318 PSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGGK 377



 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 41/120 (34%), Positives = 67/120 (55%), Gaps = 1/120 (0%)
 Frame = +2

Query: 77  TMASLRQGCAQLSSVDNGKVLHCCVLRRHLESNVIVSTAIVDLYAKSGAVKLARSVFS-A 253
           T+ SL   C  L  +  G+ +H  + R H  S V+V TA++D+YAK   +  A  VF   
Sbjct: 460 TLVSLVYCCTLLGLLREGRSVHATLTRFHFASEVVVMTALIDMYAKCSKINSAEMVFKYG 519

Query: 254 MKEKNVISWTAMLMGLAQNGHAEEAFKIFGQMQEEGVDVNAFTLVSLIHACAHVGSLKKG 433
           +  K+VI + +M+ G   +G   +A  ++ +M  EG+  N  T VSL+ AC+H G +++G
Sbjct: 520 LTPKDVILYNSMISGYGMHGLGHKALCVYHRMNREGLQPNESTFVSLLSACSHSGLVEEG 579



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/114 (25%), Positives = 56/114 (49%)
 Frame = +2

Query: 95  QGCAQLSSVDNGKVLHCCVLRRHLESNVIVSTAIVDLYAKSGAVKLARSVFSAMKEKNVI 274
           + C  L   + G  +    + + L     + ++I++   K+G +  A+  F  M EK+V+
Sbjct: 163 KACMFLLDYEMGMEVIGLAVCKGLAGGRFLGSSILNFLVKTGDIMCAQFFFHQMVEKDVV 222

Query: 275 SWTAMLMGLAQNGHAEEAFKIFGQMQEEGVDVNAFTLVSLIHACAHVGSLKKGQ 436
            W  M+ G  Q G   E + +F  M    ++ +A T++SLI +C  + +L  G+
Sbjct: 223 CWNVMIGGFMQEGLFREGYNLFLDMLYNKIEPSAVTMISLIQSCGEMRNLTFGK 276


>ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
           gi|238013832|gb|ACR37951.1| unknown [Zea mays]
           gi|413938826|gb|AFW73377.1| hypothetical protein
           ZEAMMB73_579690 [Zea mays]
          Length = 745

 Score =  116 bits (291), Expect = 2e-24
 Identities = 51/119 (42%), Positives = 83/119 (69%)
 Frame = +2

Query: 77  TMASLRQGCAQLSSVDNGKVLHCCVLRRHLESNVIVSTAIVDLYAKSGAVKLARSVFSAM 256
           T  S+   C  LS+++ GK +H  ++R H + NV V +A+VD+Y+K  ++K A + F  M
Sbjct: 274 TFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRM 333

Query: 257 KEKNVISWTAMLMGLAQNGHAEEAFKIFGQMQEEGVDVNAFTLVSLIHACAHVGSLKKG 433
             KN+ISWTA+++G  QNG +EEA ++F +MQ +G+D + FTL S+I +CA++ SL++G
Sbjct: 334 SCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEG 392



 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 41/119 (34%), Positives = 67/119 (56%)
 Frame = +2

Query: 77  TMASLRQGCAQLSSVDNGKVLHCCVLRRHLESNVIVSTAIVDLYAKSGAVKLARSVFSAM 256
           T+ S+   CA L+S++ G   HC  L   L   + VS A+V LY K G+++ A  +F  M
Sbjct: 375 TLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEM 434

Query: 257 KEKNVISWTAMLMGLAQNGHAEEAFKIFGQMQEEGVDVNAFTLVSLIHACAHVGSLKKG 433
              + +SWTA++ G AQ G A+E   +F +M  + V  +  T + ++ AC+  G ++KG
Sbjct: 435 LFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKG 493



 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 31/151 (20%)
 Frame = +2

Query: 77  TMASLRQGCAQLSSVDNGKVLHCCVLRRHLESNVIVSTAIVDLYAKSGAVKLARSVFSAM 256
           TM+++    + L     G+  HC +LR     N  V + +V +YAK G +  A+ VF  M
Sbjct: 142 TMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEM 201

Query: 257 KEKNV-------------------------------ISWTAMLMGLAQNGHAEEAFKIFG 343
             KNV                               I+WT M+ G  QNG   +A   F 
Sbjct: 202 DGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFR 261

Query: 344 QMQEEGVDVNAFTLVSLIHACAHVGSLKKGQ 436
           +M+ +G+ ++ +T  S++ AC  + +L++G+
Sbjct: 262 RMRFQGIAIDQYTFGSILTACGALSALEQGK 292