BLASTX nr result

ID: Coptis23_contig00037755 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037755
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284504.2| PREDICTED: two-component response regulator ...   120   1e-25
emb|CBI19004.3| unnamed protein product [Vitis vinifera]              120   1e-25
ref|XP_003526642.1| PREDICTED: two-component response regulator ...   116   2e-24
gb|AFK43691.1| unknown [Lotus japonicus]                              115   4e-24
gb|ACJ86005.1| unknown [Medicago truncatula] gi|388493820|gb|AFK...   115   4e-24

>ref|XP_002284504.2| PREDICTED: two-component response regulator ARR9-like [Vitis
           vinifera]
          Length = 240

 Score =  120 bits (300), Expect = 1e-25
 Identities = 57/66 (86%), Positives = 64/66 (96%)
 Frame = -2

Query: 251 PGMTGYDLLQRVKKSSWKDVPVVVMSSENVPSRMNMCLEGGAKEFLLKPVQLSDLRKLRP 72
           PGM+GYDLL+RVK SSWKDVPVVVMSSENVPSR+NMCLEGGA++FLLKPVQLSDL KL+P
Sbjct: 120 PGMSGYDLLKRVKGSSWKDVPVVVMSSENVPSRINMCLEGGAEDFLLKPVQLSDLEKLQP 179

Query: 71  HLLESL 54
           HLL+SL
Sbjct: 180 HLLKSL 185


>emb|CBI19004.3| unnamed protein product [Vitis vinifera]
          Length = 232

 Score =  120 bits (300), Expect = 1e-25
 Identities = 57/66 (86%), Positives = 64/66 (96%)
 Frame = -2

Query: 251 PGMTGYDLLQRVKKSSWKDVPVVVMSSENVPSRMNMCLEGGAKEFLLKPVQLSDLRKLRP 72
           PGM+GYDLL+RVK SSWKDVPVVVMSSENVPSR+NMCLEGGA++FLLKPVQLSDL KL+P
Sbjct: 112 PGMSGYDLLKRVKGSSWKDVPVVVMSSENVPSRINMCLEGGAEDFLLKPVQLSDLEKLQP 171

Query: 71  HLLESL 54
           HLL+SL
Sbjct: 172 HLLKSL 177


>ref|XP_003526642.1| PREDICTED: two-component response regulator ARR9-like [Glycine max]
          Length = 232

 Score =  116 bits (290), Expect = 2e-24
 Identities = 54/70 (77%), Positives = 66/70 (94%)
 Frame = -2

Query: 251 PGMTGYDLLQRVKKSSWKDVPVVVMSSENVPSRMNMCLEGGAKEFLLKPVQLSDLRKLRP 72
           PGM+GYDLL+RVK SSWKDVPVV+MSSENVPSR++MCLE GA+EFLLKP+QLSDL KL+P
Sbjct: 105 PGMSGYDLLKRVKGSSWKDVPVVIMSSENVPSRISMCLEEGAQEFLLKPLQLSDLDKLQP 164

Query: 71  HLLESLESSC 42
           + L+SL++SC
Sbjct: 165 YFLKSLDNSC 174


>gb|AFK43691.1| unknown [Lotus japonicus]
          Length = 224

 Score =  115 bits (288), Expect = 4e-24
 Identities = 54/72 (75%), Positives = 66/72 (91%)
 Frame = -2

Query: 251 PGMTGYDLLQRVKKSSWKDVPVVVMSSENVPSRMNMCLEGGAKEFLLKPVQLSDLRKLRP 72
           PGM+GYDLL+RVK SSWKDVPVVVMSSENVPSR++MCLE GA++FLLKP+QLSDL KL+P
Sbjct: 101 PGMSGYDLLKRVKGSSWKDVPVVVMSSENVPSRISMCLEEGAEKFLLKPLQLSDLEKLQP 160

Query: 71  HLLESLESSCND 36
           +  +SL+ SC+D
Sbjct: 161 YFPKSLDESCDD 172


>gb|ACJ86005.1| unknown [Medicago truncatula] gi|388493820|gb|AFK34976.1| unknown
           [Medicago truncatula]
          Length = 235

 Score =  115 bits (288), Expect = 4e-24
 Identities = 54/72 (75%), Positives = 68/72 (94%)
 Frame = -2

Query: 251 PGMTGYDLLQRVKKSSWKDVPVVVMSSENVPSRMNMCLEGGAKEFLLKPVQLSDLRKLRP 72
           PGM+GYDLL+RVK SSWKDVPVVVMSSENVPSR++MCLE GA+EFL+KP+QLSDL+KL+P
Sbjct: 105 PGMSGYDLLKRVKGSSWKDVPVVVMSSENVPSRISMCLEEGAEEFLMKPLQLSDLQKLQP 164

Query: 71  HLLESLESSCND 36
           + L+SLE+S ++
Sbjct: 165 YFLKSLENSSDE 176


Top