BLASTX nr result

ID: Coptis23_contig00037748 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037748
         (208 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536992.1| PREDICTED: uncharacterized protein LOC100819...    75   5e-12
ref|NP_189620.1| General transcription factor 2-related zinc fin...    74   2e-11
gb|AAF82236.1|AC069143_12 Contains similarity to a transposable ...    70   2e-10
ref|NP_173360.1| TTF-type zinc finger protein with HAT dimerizat...    70   2e-10
ref|XP_003589867.1| hypothetical protein MTR_1g040620 [Medicago ...    69   5e-10

>ref|XP_003536992.1| PREDICTED: uncharacterized protein LOC100819269 [Glycine max]
          Length = 557

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 39/66 (59%), Positives = 46/66 (69%)
 Frame = +2

Query: 2   IETFLNR*SNQVRREYRIYLTAISDCSRFLLRQGLAFCGHDESEESVNKVNFLELIRFLK 181
           IE  +++ S QVR  YR  LTA  DC RFLL+QG AF GHDES  S N+ NFLEL+RFL 
Sbjct: 131 IEVVISKQSKQVRDLYRRRLTASIDCIRFLLKQGFAFRGHDESTNSANQGNFLELLRFLV 190

Query: 182 DHKEVI 199
           +H E I
Sbjct: 191 EHNESI 196


>ref|NP_189620.1| General transcription factor 2-related zinc finger protein
           [Arabidopsis thaliana] gi|332644085|gb|AEE77606.1|
           General transcription factor 2-related zinc finger
           protein [Arabidopsis thaliana]
          Length = 505

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 37/67 (55%), Positives = 47/67 (70%)
 Frame = +2

Query: 8   TFLNR*SNQVRREYRIYLTAISDCSRFLLRQGLAFCGHDESEESVNKVNFLELIRFLKDH 187
           T L++ +N V+ +YRI L A  D SR LL QGL F GHDESEES NK NFLEL++++   
Sbjct: 25  TALHKQTNVVKNDYRIRLNASIDVSRHLLHQGLPFRGHDESEESTNKGNFLELLKYIAGQ 84

Query: 188 KEVIKNV 208
            EV+K V
Sbjct: 85  NEVVKKV 91


>gb|AAF82236.1|AC069143_12 Contains similarity to a transposable element Tip100 protein for
           transposase from Ipomoea purpurea gb|4063769 and is a
           member of the transmembrane 4 family PF|00335
           [Arabidopsis thaliana]
          Length = 811

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 35/69 (50%), Positives = 48/69 (69%)
 Frame = +2

Query: 2   IETFLNR*SNQVRREYRIYLTAISDCSRFLLRQGLAFCGHDESEESVNKVNFLELIRFLK 181
           I+  L++ ++ V+ +YRI+L A  D SR LL QGL F GHDESEES NK NF+EL+++  
Sbjct: 197 IKHALHKQTDVVKNDYRIWLNASIDVSRHLLHQGLPFRGHDESEESTNKGNFVELLKYTA 256

Query: 182 DHKEVIKNV 208
              EV+K V
Sbjct: 257 GQNEVVKKV 265


>ref|NP_173360.1| TTF-type zinc finger protein with HAT dimerization domain
           [Arabidopsis thaliana] gi|332191703|gb|AEE29824.1|
           TTF-type zinc finger protein with HAT dimerization
           domain [Arabidopsis thaliana]
          Length = 769

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 35/69 (50%), Positives = 48/69 (69%)
 Frame = +2

Query: 2   IETFLNR*SNQVRREYRIYLTAISDCSRFLLRQGLAFCGHDESEESVNKVNFLELIRFLK 181
           I+  L++ ++ V+ +YRI+L A  D SR LL QGL F GHDESEES NK NF+EL+++  
Sbjct: 155 IKHALHKQTDVVKNDYRIWLNASIDVSRHLLHQGLPFRGHDESEESTNKGNFVELLKYTA 214

Query: 182 DHKEVIKNV 208
              EV+K V
Sbjct: 215 GQNEVVKKV 223


>ref|XP_003589867.1| hypothetical protein MTR_1g040620 [Medicago truncatula]
           gi|355478915|gb|AES60118.1| hypothetical protein
           MTR_1g040620 [Medicago truncatula]
          Length = 665

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 37/71 (52%), Positives = 50/71 (70%), Gaps = 4/71 (5%)
 Frame = +2

Query: 2   IETFLNR*SNQVRREYRIYLTAISDCSRFLLRQGLAFCGHDESEESVNKVNFLELIRFL- 178
           IE  +N+ S+ V+REYRI+LT   +C R LL+ GLAF G DESE+S NK NFL +++FL 
Sbjct: 178 IEVVVNKQSDLVKREYRIHLTGTIECIRLLLKLGLAFRGDDESEDSKNKGNFLYILQFLA 237

Query: 179 ---KDHKEVIK 202
              K+  EV+K
Sbjct: 238 KNDKEFGEVLK 248


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